RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 TRIM42Q8IWZ5 723 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 OR13H1Q8NG92 308 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 CAGE1Q8TC20 777 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 MKNK1Q9BUB5 465 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 RASSF4Q9H2L5 321 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 CLMPQ9H6B4 373 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 SRA1Q9HD15 236 aaKnown RBP7.27□□□□□ -1.25
TCF4-213ENST00000562543 SEMA4GQ9NTN9 838 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 DUSP12Q9UNI6 340 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 ASXL3Q9C0F0 2248 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 MIA3Q5JRA6 1907 aa7.27□□□□□ -1.25
TCF4-213ENST00000562543 DENND4AQ7Z401 1863 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 PI4KAP2A4QPH2 592 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 DHX15O43143 795 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 PARNO95453 639 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 TOP3BO95985 862 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 AMHP03971 560 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 NEFMP07197 916 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 DCNP07585 359 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 PTGS1P23219 599 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 CCR10P46092 362 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 IRAK1P51617 712 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 GP2P55259 537 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 RBL2Q08999 1139 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 CSRP2Q16527 193 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 TAF7LQ5H9L4 462 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 SPECC1Q5M775 1068 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 KSR2Q6VAB6 950 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 KIAA1211Q6ZU35 1233 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 LRRC8DQ7L1W4 858 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 ZDHHC13Q8IUH4 622 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 ZDHHC14Q8IZN3 488 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 VGLL2Q8N8G2 317 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 PI4KAP1Q8N8J0 262 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 ATRIPQ8WXE1 791 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 NELL1Q92832 810 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 NEK1Q96PY6 1258 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 SCNM1Q9BWG6 230 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 PUS3Q9BZE2 481 aaKnown RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 PI4KBQ9UBF8 816 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 FBXO4Q9UKT5 387 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 FBXL21Q9UKT6 434 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
TCF4-213ENST00000562543 FOCADQ5VW36 1801 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 MROH7-TTC4A0A0A0MT08 1334 aa7.26□□□□□ -1.25
TCF4-213ENST00000562543 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 TNFRSF10BO14763 440 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 ZBTB39O15060 712 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 PAX4O43316 350 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 CAPNS1P04632 268 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 GLULP15104 373 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
TCF4-213ENST00000562543 DNAJB1P25685 340 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 TNFAIP2Q03169 654 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 TMEM132BQ14DG7 1078 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 OCLNQ16625 522 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 CCDC57Q2TAC2 916 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 C16orf46Q6P387 395 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 RBM23Q86U06 439 aaKnown RBP7.25□□□□□ -1.25
TCF4-213ENST00000562543 RIOX2Q8IUF8 465 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 ACER1Q8TDN7 264 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 UBASH3BQ8TF42 649 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 UTP4Q969X6 686 aaKnown RBP7.25□□□□□ -1.25
TCF4-213ENST00000562543 ATG4CQ96DT6 458 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 FGD4Q96M96 766 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 POMKQ9H5K3 350 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 C7orf69Q9H7B7 122 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 DNHD1Q96M86 4753 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 GREB1Q4ZG55 1949 aa7.25□□□□□ -1.25
TCF4-213ENST00000562543 SHROOM3Q8TF72 1996 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 NOTCH2Q04721 2471 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 PLXNA4Q9HCM2 1894 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 GPR75-ASB3A0A0A6YYF3 556 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 KIAA1324LA8MWY0 1029 aaPredicted RBP7.24□□□□□ -1.25
TCF4-213ENST00000562543 FSCN2O14926 492 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 ADAM11O75078 769 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 GH2P01242 217 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 RETP07949 1114 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 EPHA1P21709 976 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 CDC27P30260 824 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 SCNN1AP37088 669 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 MCAMP43121 646 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 PURAQ00577 322 aaKnown RBP7.24□□□□□ -1.25
TCF4-213ENST00000562543 HYAL2Q12891 473 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 LAIR1Q6GTX8 287 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 SYCE2Q6PIF2 218 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 LMBR1LQ6UX01 489 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 ARMCX2Q7L311 632 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
TCF4-213ENST00000562543 GPR152Q8TDT2 470 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 FOXD4L4Q8WXT5 416 aaPredicted RBP7.24□□□□□ -1.25
TCF4-213ENST00000562543 CLP1Q92989 425 aaKnown RBP7.24□□□□□ -1.25
TCF4-213ENST00000562543 TOP1MTQ969P6 601 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 CTAGE1Q96RT6 745 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 MUC3BQ9H195 1237 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 TBC1D17Q9HA65 648 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms