RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 LRCH2Q5VUJ6 765 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TMEM117Q9H0C3 514 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 NRBP2Q9NSY0 501 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PSMD10O75832 226 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 LAG3P18627 525 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 SFNP31947 248 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 GPC3P51654 580 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 NLRP5P59047 1200 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 DUSP6Q16828 381 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TEKT3Q9BXF9 490 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PCDHA4Q9UN74 947 aa18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 USP15Q9Y4E8 981 aaPredicted RBP18.84■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TMEM150BA6NC51 233 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 LOC730098B7Z3J9 87 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 M0R2N6 131 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TDP2O95551 362 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 DARSP14868 501 aaKnown RBP18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 FGFR4P22455 802 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PBX3P40426 434 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 JAK3P52333 1124 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PLCB3Q01970 1234 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 DRP2Q13474 957 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TARBP2Q15633 366 aaKnown RBP18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 NPY5RQ15761 445 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 Q4G0T1 1027 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 HFE2Q6ZVN8 426 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ECHDC2Q86YB7 292 aa18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 HOXA2O43364 376 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 STBD1O95210 358 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TBC1D8BQ0IIM8 1120 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 KCNC3Q14003 757 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CLLU1OSQ5K130 101 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PLPP4Q5VZY2 271 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PDE12Q6L8Q7 609 aaKnown RBP18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TRIM22Q8IYM9 498 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ZNF710Q8N1W2 664 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 LRRC43Q8N309 656 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 AIFM3Q96NN9 605 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CDCA3Q99618 268 aaPredicted RBP18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 LZTS1Q9Y250 596 aa18.82■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CYP3A7-CYP3A51PA0A087WV96 503 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CSDE1O75534 798 aaKnown RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ATF7P17544 494 aaPredicted RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CYP3A7P24462 503 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SSRP1Q08945 709 aaKnown RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CBX2Q14781 532 aaPredicted RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MTERF2Q49AM1 385 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 KCNT2Q6UVM3 1135 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MIER3Q7Z3K6 550 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ZNF598Q86UK7 904 aaKnown RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ABI1Q8IZP0 508 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 BLIDQ8IZY5 108 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 RNF169Q8NCN4 708 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ETNPPLQ8TBG4 499 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 NLRP7Q8WX94 980 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SUSD6Q92537 303 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MBOAT7Q96N66 472 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TCF25Q9BQ70 676 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SH2D3AQ9BRG2 576 aa18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 NIFKQ9BYG3 293 aaKnown RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SEPT9Q9UHD8 586 aaPredicted RBP18.81■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 A0A0U1RQF3 1178 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 FSD2A1L4K1 749 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 HIDE1A8MVS5 230 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 DEXIO95424 95 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TMEM184AQ6ZMB5 413 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 DAGLBQ8NCG7 672 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 EDAQ92838 391 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ZNF274Q96GC6 653 aaPredicted RBP18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ZNF558Q96NG5 402 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SCLT1Q96NL6 688 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ENTPD7Q9NQZ7 604 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 IGKV6-21A0A0C4DH24 114 aa18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 EPB41L2O43491 1005 aaKnown RBP18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 STK3Q13188 491 aa18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 XKR3Q5GH77 459 aa18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 HELQQ8TDG4 1101 aa18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PHF7Q9BWX1 381 aaPredicted RBP18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MUC6Q6W4X9 2439 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 CPLX1O14810 134 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 EOMESO95936 686 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 PPM1AP35813 382 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 MOXD1Q6UVY6 613 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 RPGRIP1Q96KN7 1286 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 FBXL18Q96ME1 805 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 S1PR5Q9H228 398 aa18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 NGRNQ9NPE2 291 aaKnown RBP18.78■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SPG21Q9NZD8 308 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms