RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 KIF3AQ9Y496 699 aa26.67■■□□□ 1.86
CDR2-202ENST00000561630 TTC3P53804 2025 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 EVPLQ92817 2033 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 LYPLA2O95372 231 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 TRAPPC10P48553 1259 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 DSC3Q14574 896 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 SLC24A5Q71RS6 500 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 OTUD6AQ7L8S5 288 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 TPH2Q8IWU9 490 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 NLRP7Q8WX94 980 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 SLC7A3Q8WY07 619 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 SCLT1Q96NL6 688 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 PRDM6Q9NQX0 595 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 SUCLA2Q9P2R7 463 aaPredicted RBP26.66■■□□□ 1.86
CDR2-202ENST00000561630 XIRP2A4UGR9 3374 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 CUL9Q8IWT3 2517 aa26.66■■□□□ 1.86
CDR2-202ENST00000561630 SPTBN5Q9NRC6 3674 aaKnown RBP26.66■■□□□ 1.86
CDR2-202ENST00000561630 C9IYK1 514 aa26.65■■□□□ 1.86
CDR2-202ENST00000561630 LINC00271P0C7V0 271 aa26.65■■□□□ 1.86
CDR2-202ENST00000561630 BTG3Q14201 252 aaPredicted RBP26.65■■□□□ 1.86
CDR2-202ENST00000561630 NEK9Q8TD19 979 aa26.65■■□□□ 1.86
CDR2-202ENST00000561630 CLP1Q92989 425 aaKnown RBP26.65■■□□□ 1.86
CDR2-202ENST00000561630 DHX33Q9H6R0 707 aaKnown RBP26.65■■□□□ 1.86
CDR2-202ENST00000561630 RNF216Q9NWF9 866 aaPredicted RBP26.65■■□□□ 1.86
CDR2-202ENST00000561630 LRFN2Q9ULH4 789 aa26.65■■□□□ 1.86
CDR2-202ENST00000561630 PRRC2BQ5JSZ5 2229 aaKnown RBP26.65■■□□□ 1.86
CDR2-202ENST00000561630 ZBTB39O15060 712 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 RFC5P40937 340 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 ZNF174Q15697 407 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 TTC38Q5R3I4 469 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 ZNF410Q86VK4 478 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 CMTR2Q8IYT2 770 aaKnown RBP26.64■■□□□ 1.86
CDR2-202ENST00000561630 GCOM2Q9BZD3 368 aaPredicted RBP26.64■■□□□ 1.86
CDR2-202ENST00000561630 RWDD3Q9Y3V2 267 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 PCDHB7Q9Y5E2 793 aa26.64■■□□□ 1.86
CDR2-202ENST00000561630 H3BNC9 293 aa26.63■■□□□ 1.85
CDR2-202ENST00000561630 POLGP54098 1239 aaPredicted RBP26.63■■□□□ 1.85
CDR2-202ENST00000561630 FAM189BP81408 668 aa26.63■■□□□ 1.85
CDR2-202ENST00000561630 RHPN2Q8IUC4 686 aa26.63■■□□□ 1.85
CDR2-202ENST00000561630 BACH2Q9BYV9 841 aa26.63■■□□□ 1.85
CDR2-202ENST00000561630 NOL7Q9UMY1 257 aaKnown RBP26.63■■□□□ 1.85
CDR2-202ENST00000561630 A0A087WZ62 844 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 POTEMA6NI47 508 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 C5orf67F2Z3F1 127 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 OR52Z1P0C646 297 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 BMPR1AP36894 532 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 XKR9Q5GH70 373 aa26.62■■□□□ 1.85
CDR2-202ENST00000561630 FDXACB1Q9BRP7 624 aaPredicted RBP26.62■■□□□ 1.85
CDR2-202ENST00000561630 CSDE1O75534 798 aaKnown RBP26.61■■□□□ 1.85
CDR2-202ENST00000561630 RB1P06400 928 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 ZSCAN20P17040 1043 aaPredicted RBP26.61■■□□□ 1.85
CDR2-202ENST00000561630 CTNNB1P35222 781 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 GPM6BQ13491 265 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 ELAC1Q9H777 363 aaKnown RBP26.61■■□□□ 1.85
CDR2-202ENST00000561630 ANKEF1Q9NU02 776 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 THEGQ9P2T0 379 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 LOXHD1Q8IVV2 1947 aa26.61■■□□□ 1.85
CDR2-202ENST00000561630 GAS2O43903 313 aaKnown RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 IBSPP21815 317 aaPredicted RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 FGFR4P22455 802 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 GJB2P29033 226 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 EMC2Q15006 297 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 KSR1Q8IVT5 923 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 ATXN2LQ8WWM7 1075 aaKnown RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 PRPF31Q8WWY3 499 aaKnown RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 TMEM143Q96AN5 459 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 INO80BQ9C086 356 aaPredicted RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 TMEM161AQ9NX61 479 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 COL4A3BPQ9Y5P4 624 aa26.6■■□□□ 1.85
CDR2-202ENST00000561630 MRPL42Q9Y6G3 142 aaKnown RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 COL4A4P53420 1690 aaPredicted RBP26.6■■□□□ 1.85
CDR2-202ENST00000561630 SPATA31C1P0DKV0 1188 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 SFPQP23246 707 aaKnown RBP eCLIP26.59■■□□□ 1.85
CDR2-202ENST00000561630 TECP42680 631 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 GATMP50440 423 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 TOB1P50616 345 aaPredicted RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 NBR1Q14596 966 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 SKIV2LQ15477 1246 aaKnown RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 PAN2Q504Q3 1202 aaKnown RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 C4orf32Q8N8J7 132 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 PSPC1Q8WXF1 523 aaKnown RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 MRPL38Q96DV4 380 aaKnown RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 NLRP4Q96MN2 994 aa26.59■■□□□ 1.85
CDR2-202ENST00000561630 C11orf84Q9BUA3 381 aaPredicted RBP26.59■■□□□ 1.85
CDR2-202ENST00000561630 XRCC6P12956 609 aaKnown RBP eCLIP26.58■■□□□ 1.85
CDR2-202ENST00000561630 PTPROQ16827 1216 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 FAM102BQ5T8I3 360 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 TCP11Q8WWU5 503 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 PLVAPQ9BX97 442 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 ATP6V0A4Q9HBG4 840 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 IFT122Q9HBG6 1241 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 TUFT1Q9NNX1 390 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 CHST12Q9NRB3 414 aa26.58■■□□□ 1.85
CDR2-202ENST00000561630 BMP2KQ9NSY1 1161 aaPredicted RBP26.58■■□□□ 1.85
CDR2-202ENST00000561630 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.58■■□□□ 1.85
CDR2-202ENST00000561630 DLL1O00548 723 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 LAMTOR4Q0VGL1 99 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 CATSPER3Q86XQ3 398 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 PIGOQ8TEQ8 1089 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 MTRQ99707 1265 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms