RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 DARSP14868 501 aaKnown RBP17.32■□□□□ 0.36
CCDC113-203ENST00000561517 YWHABP31946 246 aaKnown RBP17.32■□□□□ 0.36
CCDC113-203ENST00000561517 SARSP49591 514 aaKnown RBP17.32■□□□□ 0.36
CCDC113-203ENST00000561517 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
CCDC113-203ENST00000561517 ZNF174Q15697 407 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 OTUD6AQ7L8S5 288 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 TPH2Q8IWU9 490 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 EXOC8Q8IYI6 725 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 FIBCD1Q8N539 461 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 GDPD5Q8WTR4 605 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 ADAM2Q99965 735 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 MTUS1Q9ULD2 1270 aa17.32■□□□□ 0.36
CCDC113-203ENST00000561517 DENND3A2RUS2 1198 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 RFC5P40937 340 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 EPC2Q52LR7 807 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 SLC24A5Q71RS6 500 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 ZNF410Q86VK4 478 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 TMEM192Q8IY95 271 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 FBXO22Q8NEZ5 403 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 SLC7A3Q8WY07 619 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 PPM1EQ8WY54 764 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 CLP1Q92989 425 aaKnown RBP17.31■□□□□ 0.36
CCDC113-203ENST00000561517 ZNF668Q96K58 619 aaPredicted RBP17.31■□□□□ 0.36
CCDC113-203ENST00000561517 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
CCDC113-203ENST00000561517 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
CCDC113-203ENST00000561517 ATG2AQ2TAZ0 1938 aa17.31■□□□□ 0.36
CCDC113-203ENST00000561517 A0A0C4DFX4 3053 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 POTEMA6NI47 508 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 ZBTB39O15060 712 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 GJB2P29033 226 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
CCDC113-203ENST00000561517 FAM189BP81408 668 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 CCDC85BQ15834 202 aaPredicted RBP17.3■□□□□ 0.36
CCDC113-203ENST00000561517 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 CMTR2Q8IYT2 770 aaKnown RBP17.3■□□□□ 0.36
CCDC113-203ENST00000561517 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 SCLT1Q96NL6 688 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
CCDC113-203ENST00000561517 ANKEF1Q9NU02 776 aa17.3■□□□□ 0.36
CCDC113-203ENST00000561517 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
CCDC113-203ENST00000561517 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 A0A087WZ62 844 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 GAS2O43903 313 aaKnown RBP17.29■□□□□ 0.36
CCDC113-203ENST00000561517 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
CCDC113-203ENST00000561517 BTG3Q14201 252 aaPredicted RBP17.29■□□□□ 0.36
CCDC113-203ENST00000561517 RHPN2Q8IUC4 686 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 FDXACB1Q9BRP7 624 aaPredicted RBP17.29■□□□□ 0.36
CCDC113-203ENST00000561517 ELAC1Q9H777 363 aaKnown RBP17.29■□□□□ 0.36
CCDC113-203ENST00000561517 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 RWDD3Q9Y3V2 267 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 PCDHB7Q9Y5E2 793 aa17.29■□□□□ 0.36
CCDC113-203ENST00000561517 H3BNC9 293 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 RB1P06400 928 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCDC113-203ENST00000561517 BMPR1AP36894 532 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 TECP42680 631 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 NBR1Q14596 966 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 EMC2Q15006 297 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 MICALL1Q8N3F8 863 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 TCP11Q8WWU5 503 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 POLR3CQ9BUI4 534 aaPredicted RBP17.28■□□□□ 0.36
CCDC113-203ENST00000561517 INO80BQ9C086 356 aaPredicted RBP17.28■□□□□ 0.36
CCDC113-203ENST00000561517 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 TMEM161AQ9NX61 479 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
CCDC113-203ENST00000561517 COL4A3BPQ9Y5P4 624 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 UNC80Q8N2C7 3258 aa17.28■□□□□ 0.36
CCDC113-203ENST00000561517 REV3LO60673 3130 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 CSDE1O75534 798 aaKnown RBP17.27■□□□□ 0.36
CCDC113-203ENST00000561517 ZSCAN20P17040 1043 aaPredicted RBP17.27■□□□□ 0.36
CCDC113-203ENST00000561517 FGFR4P22455 802 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 GPM6BQ13491 265 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 CUL4AQ13619 759 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 KSR1Q8IVT5 923 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
CCDC113-203ENST00000561517 PSPC1Q8WXF1 523 aaKnown RBP17.27■□□□□ 0.36
CCDC113-203ENST00000561517 TMEM143Q96AN5 459 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 IFT122Q9HBG6 1241 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 PCDHB6Q9Y5E3 794 aa17.27■□□□□ 0.36
CCDC113-203ENST00000561517 MRPL42Q9Y6G3 142 aaKnown RBP17.27■□□□□ 0.36
CCDC113-203ENST00000561517 ASAP2O43150 1006 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 MED24O75448 989 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 DGAT1O75907 488 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 SFPQP23246 707 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC113-203ENST00000561517 RPA1P27694 616 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 CTNNB1P35222 781 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 RARRES1P49788 294 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 GATMP50440 423 aa17.26■□□□□ 0.35
CCDC113-203ENST00000561517 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms