RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 TECP42680 631 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 CLCN3P51790 818 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 PRR16Q569H4 304 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 LENG9Q96B70 501 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 ASIC4Q96FT7 647 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 SAMM50Q9Y512 469 aa13.38□□□□□ -0.27
CARMIL3-204ENST00000561354 NID2Q14112 1375 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 A0A0U1RQF3 1178 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 EOMESO95936 686 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 OATP04181 439 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 GPC3P51654 580 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 FGD1P98174 961 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 TCF15Q12870 199 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 CASP10Q92851 521 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 RIT2Q99578 217 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
CARMIL3-204ENST00000561354 ZNF862O60290 1169 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 SFNP31947 248 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 USP11P51784 963 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 CLLU1OSQ5K130 101 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 ZNF598Q86UK7 904 aaKnown RBP13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 KCNB2Q92953 911 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 NECTIN4Q96NY8 510 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
CARMIL3-204ENST00000561354 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 MSH4O15457 936 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 EDIL3O43854 480 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 AVPR2P30518 371 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 PBX3P40426 434 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 JAK3P52333 1124 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 NUBP1P53384 320 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 PRKCEQ02156 737 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 ITIH3Q06033 890 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 TARBP2Q15633 366 aaKnown RBP13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 NTRK3Q16288 839 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 Q6ZUG5 572 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 BRF1Q92994 677 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 CHST12Q9NRB3 414 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 HCFC2Q9Y5Z7 792 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
CARMIL3-204ENST00000561354 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 GAS7O60861 476 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 CDC45O75419 566 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 ALDH7A1P49419 539 aaKnown RBP13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 TBC1D8BQ0IIM8 1120 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 CES5AQ6NT32 575 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 RNF169Q8NCN4 708 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 RDM1Q8NG50 284 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 PHKBQ93100 1093 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
CARMIL3-204ENST00000561354 ST18O60284 1047 aa13.33□□□□□ -0.28
CARMIL3-204ENST00000561354 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
CARMIL3-204ENST00000561354 CPA1P15085 419 aa13.33□□□□□ -0.28
CARMIL3-204ENST00000561354 HSPA4P34932 840 aa13.33□□□□□ -0.28
CARMIL3-204ENST00000561354 BCAR1P56945 870 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms