RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 EIF4BP23588 611 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 QARSP47897 775 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 GUCY1B3Q02153 619 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 DSC3Q14574 896 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 SLC24A5Q71RS6 500 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 NLRP7Q8WX94 980 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 UHRF1Q96T88 793 aaPredicted RBP19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 KIF2CQ99661 725 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 LXNQ9BS40 222 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 UBE2ZQ9H832 354 aaPredicted RBP19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 PCDHB7Q9Y5E2 793 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 RB1P06400 928 aa19.29■□□□□ 0.68
CDC42BPB-208ENST00000561271 FGFR4P22455 802 aa19.29■□□□□ 0.68
CDC42BPB-208ENST00000561271 SPIRE1Q08AE8 756 aa19.29■□□□□ 0.68
CDC42BPB-208ENST00000561271 TCEAL5Q5H9L2 206 aa19.29■□□□□ 0.68
CDC42BPB-208ENST00000561271 HCSTQ9UBK5 93 aa19.29■□□□□ 0.68
CDC42BPB-208ENST00000561271 IGKV6-21A0A0C4DH24 114 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 TBKBP1A7MCY6 615 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 CSDE1O75534 798 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 DARSP14868 501 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 NPEPPSP55786 919 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 CYP4A11Q02928 519 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 FAM102BQ5T8I3 360 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 SLFN12Q8IYM2 578 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 PLVAPQ9BX97 442 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 NSUN3Q9H649 340 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 CYP26B1Q9NR63 512 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 BMP2KQ9NSY1 1161 aaPredicted RBP19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 RGL1Q9NZL6 768 aa19.28■□□□□ 0.68
CDC42BPB-208ENST00000561271 C5orf42Q9H799 3197 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 TRIP11Q15643 1979 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 TNFRSF10AO00220 468 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 MAFO75444 373 aaPredicted RBP19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 P4HBP07237 508 aaKnown RBP19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 FGFR1P11362 822 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 KCNA5P22460 613 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 EPHA7Q15375 998 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 CALCRLQ16602 461 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 RHPN2Q8IUC4 686 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 ZNF710Q8N1W2 664 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 DYDC2Q96IM9 177 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 LMAN2LQ9H0V9 348 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 TMEM161AQ9NX61 479 aa19.27■□□□□ 0.68
CDC42BPB-208ENST00000561271 A0A087WZ62 844 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 NEMFO60524 1076 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 ITGB1P05556 798 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 DNM2P50570 870 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 CTTNQ14247 550 aaKnown RBP19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 FAM43BQ6ZT52 329 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 KSR1Q8IVT5 923 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 KLHL23Q8NBE8 558 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 C8orf76Q96K31 380 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 CEP170P1Q96L14 293 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 NLRP4Q96MN2 994 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 FDXACB1Q9BRP7 624 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 ATP6V0A4Q9HBG4 840 aa19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 SUCLA2Q9P2R7 463 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPB-208ENST00000561271 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 ATP2B1P20020 1258 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 YWHABP31946 246 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 POLGP54098 1239 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 SPOUT1Q5T280 376 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 RNF169Q8NCN4 708 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 P2RX5Q93086 422 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 LLPHQ9BRT6 129 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 GCOM2Q9BZD3 368 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 RNF19AQ9NV58 838 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 PLAGL2Q9UPG8 496 aa19.25■□□□□ 0.67
CDC42BPB-208ENST00000561271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 DNAJB1P25685 340 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 FAM189BP81408 668 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 CAMK1Q14012 370 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 EMC2Q15006 297 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 SAFBQ15424 915 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 EP400NLQ6ZTU2 488 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 ZNF410Q86VK4 478 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 ECHDC2Q86YB7 292 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 SLC7A3Q8WY07 619 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 JPH2Q9BR39 696 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 DHX33Q9H6R0 707 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 ELAC1Q9H777 363 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 TTC12Q9H892 705 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 PCDHA12Q9UN75 941 aa19.24■□□□□ 0.67
CDC42BPB-208ENST00000561271 POTEMA6NI47 508 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 H3BQ06 376 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 ZBTB39O15060 712 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 MCM7P33993 719 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 TXKP42681 527 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 XKR9Q5GH70 373 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 TPH2Q8IWU9 490 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 TMEM143Q96AN5 459 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 ZSCAN31Q96LW9 406 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms