RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	INO80B	Q9C086	356 aa	Predicted RBP	28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	NT5C3A	Q9H0P0	336 aa		28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	BMP2K	Q9NSY1	1161 aa	Predicted RBP	28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	DNM3	Q9UQ16	869 aa		28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	PCDHA11	Q9Y5I1	949 aa		28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	COL4A3BP	Q9Y5P4	624 aa		28.69	■■■□□ 2.18
TCF12-222	ENST00000561152	TMEM265	A0A087WTH1	108 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	F13A1	P00488	732 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	CDC25A	P30304	524 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	DEFB103A	P81534	67 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	PTPA	Q15257	358 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	MCPH1	Q8NEM0	835 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	CDK5RAP3	Q96JB5	506 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	ZBED2	Q9BTP6	218 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	ERVK-5	Q9HDB9	667 aa		28.68	■■■□□ 2.18
TCF12-222	ENST00000561152	MORC2	Q9Y6X9	1032 aa	Predicted RBP	28.68	■■■□□ 2.18
TCF12-222	ENST00000561152		A0A087WWV3	80 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	USO1	O60763	962 aa	Known RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	DARS	P14868	501 aa	Known RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	CEBPZ	Q03701	1054 aa	Known RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	MXD4	Q14582	209 aa	Predicted RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	ECM1	Q16610	540 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	ZNF697	Q5TEC3	545 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	28.67	■■■□□ 2.18	2e-8	■■□□□ 12.4
TCF12-222	ENST00000561152	MYOCD	Q8IZQ8	938 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	PRPF31	Q8WWY3	499 aa	Known RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	TIFA	Q96CG3	184 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	NLRP4	Q96MN2	994 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	USP28	Q96RU2	1077 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	MMTAG2	Q9BU76	263 aa	Known RBP	28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	ST3GAL5	Q9UNP4	418 aa		28.67	■■■□□ 2.18
TCF12-222	ENST00000561152	GBF1	Q92538	1859 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	UBA7	P41226	1012 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	HYI	Q5T013	277 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	FOXD4L5	Q5VV16	416 aa	Predicted RBP	28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	FAM228A	Q86W67	206 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	ZNF668	Q96K58	619 aa	Predicted RBP	28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	XPNPEP1	Q9NQW7	623 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	PTPRS	Q13332	1948 aa		28.66	■■■□□ 2.18
TCF12-222	ENST00000561152	LAMA2	P24043	3122 aa	Known RBP	28.65	■■■□□ 2.18
TCF12-222	ENST00000561152		A0A087WZ62	844 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	LAMTOR4	Q0VGL1	99 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	SLC39A14	Q15043	492 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	ZRSR1	Q15695	479 aa	Known RBP	28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	PADI6	Q6TGC4	694 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	CABP7	Q86V35	215 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	CALML4	Q96GE6	196 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	FDXACB1	Q9BRP7	624 aa	Predicted RBP	28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	BHMT2	Q9H2M3	363 aa		28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	SRPRB	Q9Y5M8	271 aa	Known RBP	28.65	■■■□□ 2.18
TCF12-222	ENST00000561152	ENPP3	O14638	875 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	TLL1	O43897	1013 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	GJB5	O95377	273 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	EYA4	O95677	639 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	SFPQ	P23246	707 aa	Known RBP eCLIP	28.64	■■■□□ 2.18	1e-7	■■■□□ 15.7
TCF12-222	ENST00000561152	PBX2	P40425	430 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	NASP	P49321	788 aa	Predicted RBP	28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	RABGGTB	P53611	331 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	TFDP1	Q14186	410 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	ATL3	Q6DD88	541 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	TOP1MT	Q969P6	601 aa		28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	TSPYL2	Q9H2G4	693 aa	Predicted RBP	28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	RNF216	Q9NWF9	866 aa	Predicted RBP	28.64	■■■□□ 2.18
TCF12-222	ENST00000561152	DENND3	A2RUS2	1198 aa		28.63	■■■□□ 2.17
TCF12-222	ENST00000561152	MARCKS	P29966	332 aa	Predicted RBP	28.63	■■■□□ 2.17
TCF12-222	ENST00000561152	STK38	Q15208	465 aa		28.63	■■■□□ 2.17
TCF12-222	ENST00000561152	KSR1	Q8IVT5	923 aa		28.63	■■■□□ 2.17
TCF12-222	ENST00000561152	SLC28A3	Q9HAS3	691 aa		28.63	■■■□□ 2.17
TCF12-222	ENST00000561152	SRGAP2C	P0DJJ0	459 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	CYP11B2	P19099	503 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	ARL2	P36404	184 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	PKP1	Q13835	747 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	SRGAP1	Q7Z6B7	1085 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	RASSF8	Q8NHQ8	419 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	RAD9A	Q99638	391 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	POLR3F	Q9H1D9	316 aa	Predicted RBP	28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	TMX1	Q9H3N1	280 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	C1orf112	Q9NSG2	853 aa		28.62	■■■□□ 2.17
TCF12-222	ENST00000561152	FBXO2	Q9UK22	296 aa	Predicted RBP	28.62	■■■□□ 2.17
TCF12-222	ENST00000561152		E9PMD0	336 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	YEATS4	O95619	227 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	ZSCAN20	P17040	1043 aa	Predicted RBP	28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	PHKA2	P46019	1235 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	POU5F1B	Q06416	359 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	KRI1	Q8N9T8	703 aa	Known RBP	28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	RNF149	Q8NC42	400 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	NKX2-4	Q9H2Z4	354 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	IFT122	Q9HBG6	1241 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	YBX2	Q9Y2T7	364 aa	Known RBP	28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	INSL6	Q9Y581	213 aa		28.61	■■■□□ 2.17
TCF12-222	ENST00000561152	TXLNA	P40222	546 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	GRIN1	Q05586	938 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	GRB10	Q13322	594 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	FAM102B	Q5T8I3	360 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	FAM117B	Q6P1L5	589 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	MAEA	Q7L5Y9	396 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	TMCO2	Q7Z6W1	182 aa	Predicted RBP	28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	DEFB123	Q8N688	67 aa		28.6	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms