RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 EIF5BO60841 1220 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 MAFO75444 373 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 SLITRK3O94933 977 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 P4HBP07237 508 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 EIF4BP23588 611 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 TXKP42681 527 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 TOB1P50616 345 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 GPM6BQ13491 265 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 CAMK1Q14012 370 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 SKIV2LQ15477 1246 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 ZNF174Q15697 407 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 C4orf19Q8IY42 314 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 NLRP4Q96MN2 994 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 DHX33Q9H6R0 707 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 TTC12Q9H892 705 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 SPTBN5Q9NRC6 3674 aaKnown RBP14.19□□□□□ -0.14
CHRNA3-208ENST00000561128 DENND3A2RUS2 1198 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 MEIS3P2A8K0S8 358 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 MED24O75448 989 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 SPATA31C1P0DKV0 1188 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 YWHABP31946 246 aaKnown RBP14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 BMPR1AP36894 532 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 RHPN2Q8IUC4 686 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 SLFN12Q8IYM2 578 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 CMTR2Q8IYT2 770 aaKnown RBP14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 C4orf32Q8N8J7 132 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 NLRP7Q8WX94 980 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 MRPL38Q96DV4 380 aaKnown RBP14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 SCLT1Q96NL6 688 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 NAP1L4Q99733 375 aaKnown RBP14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 HSD17B14Q9BPX1 270 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 IFT122Q9HBG6 1241 aa14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 SUCLA2Q9P2R7 463 aaPredicted RBP14.18□□□□□ -0.14
CHRNA3-208ENST00000561128 GPR182O15218 404 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 ITGB1P05556 798 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 GTF2F1P35269 517 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 PBX3P40426 434 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 FAM189BP81408 668 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 EMC2Q15006 297 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 TJAP1Q5JTD0 557 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 CLLU1OSQ5K130 101 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 TTC38Q5R3I4 469 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 LRRC55Q6ZSA7 311 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 SLC24A5Q71RS6 500 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 ECHDC2Q86YB7 292 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 TPH2Q8IWU9 490 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 ALG13Q9NP73 1137 aaKnown RBP14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 PCDHA12Q9UN75 941 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 PCDHB6Q9Y5E3 794 aa14.17□□□□□ -0.14
CHRNA3-208ENST00000561128 TCF20Q9UGU0 1960 aaKnown RBP14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 TBKBP1A7MCY6 615 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 MARCH6O60337 910 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 TMOD1P28289 359 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 IRS1P35568 1242 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 POLGP54098 1239 aaPredicted RBP14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 ECM1Q16610 540 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 XKR9Q5GH70 373 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 ADGRD2Q7Z7M1 963 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 ZNF598Q86UK7 904 aaKnown RBP14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 ASAP3Q8TDY4 903 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 SAMD11Q96NU1 681 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 CWH43Q9H720 699 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 C1orf112Q9NSG2 853 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 VCANP13611 3396 aa14.16□□□□□ -0.14
CHRNA3-208ENST00000561128 A0A0C4DFX4 3053 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 B4GALT3O60512 393 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LYPLA2O95372 231 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 BMP1P13497 986 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 U2AF2P26368 475 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 RARRES1P49788 294 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LAMTOR4Q0VGL1 99 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 IL17AQ16552 155 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 FAM184AQ8NB25 1140 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 KLHL23Q8NBE8 558 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 RNF169Q8NCN4 708 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 ADAMTS19Q8TE59 1207 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 PRPF31Q8WWY3 499 aaKnown RBP14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LPPQ93052 612 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 ZSWIM4Q9H7M6 989 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms