RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PANK3Q9H999 370 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 SIRT5Q9NXA8 310 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 THEGQ9P2T0 379 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 TAF6LQ9Y6J9 622 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 DMDP11532 3685 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 MYO3BQ8WXR4 1341 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 COL1A1P02452 1464 aaPredicted RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 DNAH12Q6ZR08 3092 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 ZSWIM8A7E2V4 1837 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 C5orf42Q9H799 3197 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 PDHXO00330 501 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 MPOP05164 745 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 IMPDH2P12268 514 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 SDHBP21912 280 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 MCM4P33991 863 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 PMS1P54277 932 aaKnown RBP4.93□□□□□ -1.62
HERC1-211ENST00000560983 EIF4A1P60842 406 aaKnown RBP4.93□□□□□ -1.62
HERC1-211ENST00000560983 NHLH1Q02575 133 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 SNAPC2Q13487 334 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 DLGAP5Q15398 846 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 TAF7Q15545 349 aaPredicted RBP4.93□□□□□ -1.62
HERC1-211ENST00000560983 PROSER3Q2NL68 480 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 AKNAD1Q5T1N1 836 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 TTLL5Q6EMB2 1281 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 ANKRD23Q86SG2 305 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 PPFIBP1Q86W92 1011 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 FAM129CQ86XR2 697 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 PPM1EQ8WY54 764 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 RELTQ969Z4 430 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 FAM89AQ96GI7 184 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 DHRS1Q96LJ7 313 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 CFAP54Q96N23 3096 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 JMJD8Q96S16 334 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 LBHD1Q9BQE6 289 aaPredicted RBP4.93□□□□□ -1.62
HERC1-211ENST00000560983 SPON2Q9BUD6 331 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 SLC12A9Q9BXP2 914 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 ZCCHC4Q9H5U6 513 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 AP5S1Q9NUS5 200 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 MUC6Q6W4X9 2439 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 MYO15AQ9UKN7 3530 aa4.93□□□□□ -1.62
HERC1-211ENST00000560983 FAM86C2PA6NEL3 165 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 SMIM22K7EJ46 135 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 PRKCAP17252 672 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 IGFBP6P24592 240 aaPredicted RBP4.92□□□□□ -1.62
HERC1-211ENST00000560983 AFF3P51826 1226 aaKnown RBP4.92□□□□□ -1.62
HERC1-211ENST00000560983 MVKQ03426 396 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 ERO1BQ86YB8 467 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 CERS5Q8N5B7 392 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 TM9SF2Q99805 663 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 METTL5Q9NRN9 209 aaKnown RBP4.92□□□□□ -1.62
HERC1-211ENST00000560983 FBXL21Q9UKT6 434 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 TAF1P21675 1872 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 LRRC37AA6NMS7 1700 aa4.92□□□□□ -1.62
HERC1-211ENST00000560983 DCHS1Q96JQ0 3298 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 SRGAP3O43295 1099 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 ANXA1P04083 346 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 U2AF1L5P0DN76 240 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 CYP2C8P10632 490 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 ARL4AP40617 200 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 MAPKAPK2P49137 400 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 CYP4F8P98187 520 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 FANCCQ00597 558 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 U2AF1Q01081 240 aaKnown RBP eCLIP4.91□□□□□ -1.62
HERC1-211ENST00000560983 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 PPIL2Q13356 520 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 PLEKHN1Q494U1 663 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 CFAP100Q494V2 611 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 HSP90AB3PQ58FF7 597 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 RPTNQ6XPR3 784 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 COPS6Q7L5N1 327 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 ZBTB38Q8NAP3 1195 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 NUP43Q8NFH3 380 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 CXorf38Q8TB03 319 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 ZKSCAN4Q969J2 545 aaPredicted RBP4.91□□□□□ -1.62
HERC1-211ENST00000560983 ISCA1Q9BUE6 129 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 CDADC1Q9BWV3 514 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 COA1Q9GZY4 146 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 VEZTQ9HBM0 779 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 IMPACTQ9P2X3 320 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 GJD2Q9UKL4 321 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 ALPK3Q96L96 1907 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 XDHP47989 1333 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 LAMB1P07942 1786 aa4.91□□□□□ -1.62
HERC1-211ENST00000560983 PI4K2BG5E9Z4 385 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 H0Y8X5 98 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 MEIS1O00470 390 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 FGF10O15520 208 aaPredicted RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 HTATSF1O43719 755 aaKnown RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 FOXD2O60548 495 aaPredicted RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 MSL3P1P0C860 447 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 KLRK1P26718 216 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 KCNQ1P51787 676 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 ZNF445P59923 1031 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 TFF2Q03403 129 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 PPATQ06203 517 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 NR1I3Q14994 352 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms