RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 FOXP2O15409 715 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 FOXD2O60548 495 aaPredicted RBP10.96□□□□□ -0.65
HERC1-210ENST00000560897 LRRN2O75325 713 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 CTSAP10619 480 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 ZSCAN20P17040 1043 aaPredicted RBP10.96□□□□□ -0.65
HERC1-210ENST00000560897 KLRC2P26717 231 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 POLGP54098 1239 aaPredicted RBP10.96□□□□□ -0.65
HERC1-210ENST00000560897 STARD6P59095 220 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 ALX1Q15699 326 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 VPS53Q5VIR6 699 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 LAIR1Q6GTX8 287 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 HOMER1Q86YM7 354 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 FAM126AQ9BYI3 521 aaPredicted RBP10.96□□□□□ -0.65
HERC1-210ENST00000560897 SLC2A4RGQ9NR83 387 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 DPP7Q9UHL4 492 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 ZMIZ1Q9ULJ6 1067 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 ZFYVE26Q68DK2 2539 aa10.96□□□□□ -0.66
HERC1-210ENST00000560897 FRMPD4Q14CM0 1322 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 GSTTP1A0A1W2PQM5 241 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 LILRB5O75023 590 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 FGAP02671 866 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 RETP07949 1114 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 BCAR1P56945 870 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 FAM189BP81408 668 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 LPAL2Q16609 132 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 PRR23BQ6ZRT6 265 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 CUL5Q93034 780 aa10.95□□□□□ -0.66
HERC1-210ENST00000560897 WDR6Q9NNW5 1121 aaKnown RBP10.95□□□□□ -0.66
HERC1-210ENST00000560897 NCAM2O15394 837 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 N4BP1O75113 896 aaKnown RBP10.94□□□□□ -0.66
HERC1-210ENST00000560897 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
HERC1-210ENST00000560897 NT5C2P49902 561 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 CLCN4P51793 760 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 NRLP54845 237 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 PRKCQQ04759 706 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 PPP2R5DQ14738 602 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
HERC1-210ENST00000560897 PCNX4Q63HM2 1172 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 UNQ6494/PRO21346Q6UXR6 183 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 DDX53Q86TM3 631 aaKnown RBP10.94□□□□□ -0.66
HERC1-210ENST00000560897 CMASQ8NFW8 434 aaPredicted RBP10.94□□□□□ -0.66
HERC1-210ENST00000560897 SMARCC2Q8TAQ2 1214 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 GPRASP2Q96D09 838 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 PPP1R16BQ96T49 567 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 OSMRQ99650 979 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 OSBPL6Q9BZF3 934 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 PIDD1Q9HB75 910 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 MAN1C1Q9NR34 630 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 SEMA4GQ9NTN9 838 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 STK39Q9UEW8 545 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
HERC1-210ENST00000560897 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 FAM170BA6NMN3 283 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 KLRF2D3W0D1 207 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 CCER2I3L3R5 266 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 INPPL1O15357 1258 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 KCNA2P16389 499 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 CRYBB1P53674 252 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 SNW1Q13573 536 aaKnown RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 MLF2Q15773 248 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 TSSK4Q6SA08 328 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 GET4Q7L5D6 327 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 FAM228AQ86W67 206 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 CELF5Q8N6W0 485 aaKnown RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 FEZF2Q8TBJ5 459 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 HELQQ8TDG4 1101 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 PHKBQ93100 1093 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 MYADMQ96S97 322 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 JPH1Q9HDC5 661 aaPredicted RBP10.93□□□□□ -0.66
HERC1-210ENST00000560897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.93□□□□□ -0.66
HERC1-210ENST00000560897 NUMBLQ9Y6R0 609 aa10.93□□□□□ -0.66
HERC1-210ENST00000560897 EVPLQ92817 2033 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 ZMYM6O95789 1325 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 NEDD4P46934 1319 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 SSBP05455 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
HERC1-210ENST00000560897 LAMP2P13473 410 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 PFKPQ01813 784 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 CSRP2Q16527 193 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 AASDHQ4L235 1098 aaPredicted RBP10.92□□□□□ -0.66
HERC1-210ENST00000560897 CLLU1OSQ5K130 101 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 ZBTB41Q5SVQ8 909 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 RSPO2Q6UXX9 243 aaPredicted RBP10.92□□□□□ -0.66
HERC1-210ENST00000560897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.92□□□□□ -0.66
HERC1-210ENST00000560897 ECHDC2Q86YB7 292 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 SMG7Q92540 1137 aaKnown RBP10.92□□□□□ -0.66
HERC1-210ENST00000560897 IGSF21Q96ID5 467 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms