RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 SPDYE3A6NKU9 549 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 FGGP02679 453 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 CHRNA3P32297 505 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
PBX1-219ENST00000560641 RASGRF2O14827 1237 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 LMNAP02545 664 aaKnown RBP17.35■□□□□ 0.37
PBX1-219ENST00000560641 CTNNA2P26232 953 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 PEX5P50542 639 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 MTFR1Q15390 333 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 VSTM1Q6UX27 236 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 PIGOQ8TEQ8 1089 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 ART4Q93070 314 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 PHF2O75151 1096 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 BCAMP50895 628 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 COASYQ13057 564 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 ADAM9Q13443 819 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 HLFQ16534 295 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 CYP1B1Q16678 543 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 FRMD5Q7Z6J6 570 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
PBX1-219ENST00000560641 FBXO25Q8TCJ0 367 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 TEKT4Q8WW24 435 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 DDX12PQ92771 950 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 FGFR1OP2Q9NVK5 253 aa17.35■□□□□ 0.37
PBX1-219ENST00000560641 MTRF1LQ9UGC7 380 aaKnown RBP17.35■□□□□ 0.37
PBX1-219ENST00000560641 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 MAGEB2O15479 319 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 TMEM253P0C7T8 217 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 UCHL3P15374 230 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 TECP42680 631 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 KLC1Q07866 573 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 OR52E8Q6IFG1 317 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 CGB2Q6NT52 195 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 DAAM2Q86T65 1068 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 ATL2Q8NHH9 583 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 MAGEB18Q96M61 343 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 NKX1-2Q9UD57 310 aaPredicted RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 ACTL7BQ9Y614 415 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 ITGB4P16144 1822 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 BAZ2BQ9UIF8 2168 aaKnown RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 GTPBP10A4D1E9 387 aaKnown RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 CCNT1O60563 726 aaKnown RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 CDC25CP30307 473 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 YARSP54577 528 aaKnown RBP17.34■□□□□ 0.37
PBX1-219ENST00000560641 MGAT5Q09328 741 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 VPS36Q86VN1 386 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 PNMA3Q9UL41 463 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 CYP2D7A0A087X1C5 515 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 CYTH3O43739 400 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 NMT2O60551 498 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 SMIM24O75264 130 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 VCAM1P19320 739 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 NUGGCQ68CJ6 796 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 RFFLQ8WZ73 363 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 SYT11Q9BT88 431 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 NR2E1Q9Y466 385 aa17.34■□□□□ 0.37
PBX1-219ENST00000560641 SIGLEC16A6NMB1 481 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 TRAF5O00463 557 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 RNF8O76064 485 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 GORASP1Q9BQQ3 440 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 SYT15Q9BQS2 421 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 CCDC28BQ9BUN5 200 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 SEMA4AQ9H3S1 761 aa17.33■□□□□ 0.37
PBX1-219ENST00000560641 SEC63Q9UGP8 760 aaKnown RBP17.33■□□□□ 0.37
PBX1-219ENST00000560641 SP100P23497 879 aaPredicted RBP17.33■□□□□ 0.36
PBX1-219ENST00000560641 DYNC1I2Q13409 638 aaKnown RBP17.33■□□□□ 0.36
PBX1-219ENST00000560641 RGS9BPQ6ZS82 235 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 KIF2BQ8N4N8 673 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
PBX1-219ENST00000560641 EPS8L3Q8TE67 593 aaKnown RBP17.33■□□□□ 0.36
PBX1-219ENST00000560641 GOLPH3Q9H4A6 298 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 LGALS13Q9UHV8 139 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 USP20Q9Y2K6 914 aa17.33■□□□□ 0.36
PBX1-219ENST00000560641 SYNGAP1Q96PV0 1343 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 GNA11P29992 359 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 MXRA7P84157 204 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 KCNH2Q12809 1159 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 HELBQ8NG08 1087 aaPredicted RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 SLCO2A1Q92959 643 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 CTTNBP2NLQ9P2B4 639 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 TRMT112Q9UI30 125 aaKnown RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 ADGRA3Q8IWK6 1321 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 USP17L12C9JPN9 530 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 USP17L21D6R901 530 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.36
PBX1-219ENST00000560641 AFPP02771 609 aaKnown RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 TSNAXIP1Q2TAA8 658 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 RBBP8NLQ8NC74 664 aaPredicted RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 PROCA1Q8NCQ7 364 aaPredicted RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 PNMA1Q8ND90 353 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms