RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 DSC3Q14574 896 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 NLRP7Q8WX94 980 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 ZNF689Q96CS4 500 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 SCLT1Q96NL6 688 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 ADGRA3Q8IWK6 1321 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 A0A087WZ62 844 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 DENND3A2RUS2 1198 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 C9IYK1 514 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 DKC1O60832 514 aaKnown RBP eCLIP13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 PAN2Q504Q3 1202 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 XKR9Q5GH70 373 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 TMEM192Q8IY95 271 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 FDXACB1Q9BRP7 624 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 DHX33Q9H6R0 707 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
RABGGTA-216ENST00000560243 FNDC1Q4ZHG4 1894 aaPredicted RBP13.02□□□□□ -0.32
RABGGTA-216ENST00000560243 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 OR52Z1P0C646 297 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 SPATA31C1P0DKV0 1188 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 TECP42680 631 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 MCM2P49736 904 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 DNM2P50570 870 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 FIBCD1Q8N539 461 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 NLRP4Q96MN2 994 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 PCDHB6Q9Y5E3 794 aa13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-216ENST00000560243 MED24O75448 989 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 LYPLA2O95372 231 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 FGFR1P11362 822 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 CTNNB1P35222 781 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 RFC5P40937 340 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 FAM189BP81408 668 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 EMC2Q15006 297 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 FAM102BQ5T8I3 360 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 OTUD6AQ7L8S5 288 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 CATSPER3Q86XQ3 398 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 NOL7Q9UMY1 257 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 PCDHB7Q9Y5E2 793 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
RABGGTA-216ENST00000560243 STAG3L1P0CL83 205 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 BMPR1AP36894 532 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 LAMTOR4Q0VGL1 99 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 PTGDRQ13258 359 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
RABGGTA-216ENST00000560243 GPM6BQ13491 265 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 POTEGQ6S5H5 508 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 ZNF410Q86VK4 478 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 CMTR2Q8IYT2 770 aaKnown RBP13□□□□□ -0.33
RABGGTA-216ENST00000560243 NEK9Q8TD19 979 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
RABGGTA-216ENST00000560243 SAMD11Q96NU1 681 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 JPH2Q9BR39 696 aaPredicted RBP13□□□□□ -0.33
RABGGTA-216ENST00000560243 MINDY3Q9H8M7 445 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 IFT122Q9HBG6 1241 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 RNF19AQ9NV58 838 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 KIF3AQ9Y496 699 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 PPME1Q9Y570 386 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
RABGGTA-216ENST00000560243 H3BNC9 293 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 H3BQV1 296 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 GRM6O15303 877 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 RARRES1P49788 294 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 TFF2Q03403 129 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 CUL4AQ13619 759 aa12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
RABGGTA-216ENST00000560243 IL17AQ16552 155 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms