RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PLA2G4EQ3MJ16 856 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ELOA3BQ3SY89 546 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 Q4G0T1 1027 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 CRTC2Q53ET0 693 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 CEP55Q53EZ4 464 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 NCAPH2Q6IBW4 605 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 DPP9Q86TI2 863 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 VSIG10LQ86VR7 867 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 GRAMD1CQ8IYS0 662 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 PDILTQ8N807 584 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 FSIP1Q8NA03 581 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 TRPV1Q8NER1 839 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ELOA3Q8NG57 546 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 KCNG4Q8TDN1 519 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 PPP1R13LQ8WUF5 828 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 USP6NLQ92738 828 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ERCC4Q92889 916 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 EPSTI1Q96J88 318 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 HSH2DQ96JZ2 352 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 SUSD3Q96L08 255 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 INPP4AQ96PE3 977 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 MTMR9Q96QG7 549 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 APBA2Q99767 749 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ZNF577Q9BSK1 485 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 MMTAG2Q9BU76 263 aaKnown RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 PANK2Q9BZ23 570 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 KATNBL1Q9H079 304 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 UNC45AQ9H3U1 944 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 EHMT1Q9H9B1 1298 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 AGO4Q9HCK5 861 aaKnown RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 KCNMB3Q9NPA1 279 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 JADE2Q9NQC1 790 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 KCNH7Q9NS40 1196 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 GJD2Q9UKL4 321 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 VAV3Q9UKW4 847 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ZHX1Q9UKY1 873 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 CFAP45Q9UL16 551 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 PNMA2Q9UL42 364 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 CYP3A7-CYP3A51PA0A087WV96 503 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 TMEM150BA6NC51 233 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 MEIS1O00470 390 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 FOXN1O15353 648 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 MARCH6O60337 910 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CUTAO60888 179 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SIN3BO75182 1162 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 DKK1O94907 266 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CCNE2O96020 404 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 PFKFB1P16118 471 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 GCFC2P16383 781 aaKnown RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 KCNA2P16389 499 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CYP3A7P24462 503 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CASP1P29466 404 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 RGS2P41220 211 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 ADCYAP1R1P41586 468 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 FLT3LGP49771 235 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 USP11P51784 963 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 NDUFA8P51970 172 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CYP4A11Q02928 519 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SPIRE1Q08AE8 756 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SPEM2Q0P670 501 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SFSWAPQ12872 951 aaKnown RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 KARSQ15046 597 aaKnown RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 STXBP2Q15833 593 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 UGCGQ16739 394 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 LRCH2Q5VUJ6 765 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 RESP18Q5W5W9 173 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 DTHD1Q6ZMT9 781 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 KCNK18Q7Z418 384 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 ABRAQ8N0Z2 381 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 DNERQ8NFT8 737 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 FAM200AQ8TCP9 573 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SLC5A5Q92911 643 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 C2orf49Q9BVC5 232 aaPredicted RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 SCAND2PQ9GZW5 306 aaPredicted RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 TTC12Q9H892 705 aaPredicted RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPG11-220ENST00000559933 MAP3K20Q9NYL2 800 aaKnown RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 WRAP73Q9P2S5 460 aaPredicted RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 CEP131Q9UPN4 1083 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 SRPRBQ9Y5M8 271 aaKnown RBP5.87□□□□□ -1.47
SPG11-220ENST00000559933 ELP1O95163 1332 aa5.87□□□□□ -1.47
SPG11-220ENST00000559933 CASP8AP2Q9UKL3 1982 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 IPO5O00410 1097 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 ZBTB39O15060 712 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 DHX15O43143 795 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 STRNO43815 780 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 GAS7O60861 476 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 FKTNO75072 461 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 PPP6R2O75170 966 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 MED24O75448 989 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 PSMD10O75832 226 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 GGPS1O95749 300 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 HSPA1AP0DMV8 641 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 HSPA1BP0DMV9 641 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 HSPA8P11142 646 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 PDIA4P13667 645 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 PLCG1P19174 1290 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 IGFBP4P22692 258 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 DGKGP49619 791 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms