RNA–Protein interactions for RNA: ENST00000559557.1

MRPS11-208, Transcript of mitochondrial ribosomal protein S11, human

TSL 3

Gene MRPS11, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS11-208	ENST00000559557	NEIL1	Q96FI4	390 aa	Predicted RBP	6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	GNRHR2	Q96P88	292 aa		6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	SORCS2	Q96PQ0	1159 aa		6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	TANGO6	Q9C0B7	1094 aa		6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	SIRPG	Q9P1W8	387 aa		6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	ZFR2	Q9UPR6	939 aa	Known RBP	6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	PCDHA8	Q9Y5H6	950 aa		6.59	□□□□□ -1.35
MRPS11-208	ENST00000559557	SETD1A	O15047	1707 aa	Known RBP	6.59	□□□□□ -1.36
MRPS11-208	ENST00000559557	NOS1	P29475	1434 aa		6.59	□□□□□ -1.36
MRPS11-208	ENST00000559557	SRGAP2C	P0DJJ0	459 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	PTGS1	P23219	599 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	ETV4	P43268	484 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	HMGA2	P52926	109 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	LONRF2	Q1L5Z9	754 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	NAALADL2	Q58DX5	795 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	TCTN3	Q6NUS6	607 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	CXXC5	Q7LFL8	322 aa	Known RBP	6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	TAX1BP1	Q86VP1	789 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	PTRH1	Q86Y79	214 aa	Known RBP	6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	SH3RF2	Q8TEC5	729 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	INCENP	Q9NQS7	918 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	RRP7BP	Q9NSQ0	103 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	NR2E1	Q9Y466	385 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	PHLPP1	O60346	1717 aa		6.58	□□□□□ -1.36
MRPS11-208	ENST00000559557	KIF1B	O60333	1816 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ADCY3	O60266	1144 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	AMH	P03971	560 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	HMGCR	P04035	888 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZNF888	P0CJ79	500 aa	Predicted RBP	6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	PYGM	P11217	842 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	COMT	P21964	271 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	HERVK_113	P62684	666 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	TOP3A	Q13472	1001 aa	Predicted RBP	6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	FAM209A	Q5JX71	171 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	SPDYA	Q5MJ70	313 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	OSTM1	Q86WC4	334 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	PCDH19	Q8TAB3	1148 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ADO	Q96SZ5	270 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZNF747	Q9BV97	191 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZNF341	Q9BYN7	854 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZFYVE9	O95405	1425 aa		6.57	□□□□□ -1.36
MRPS11-208	ENST00000559557	XRN1	Q8IZH2	1706 aa	Known RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	RPRD2	Q5VT52	1461 aa	Known RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	TCRBV5S4A2T	A0A5A2	114 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	CCDC66	A2RUB6	948 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	FAM90A27P	A6NNH2	459 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	ARVCF	O00192	962 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	MAN2B1	O00754	1011 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	EFCAB14	O75071	495 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	CR2	P20023	1033 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	HSPA1L	P34931	641 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	DNM2	P50570	870 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	RRAD	P55042	308 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	R3HDM1	Q15032	1099 aa	Known RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	OTOP2	Q7RTS6	562 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	WWC2-AS2	Q96NR7	200 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	DHRS4	Q9BTZ2	278 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	C12orf65	Q9H3J6	166 aa	Known RBP	6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	MSL2	Q9HCI7	577 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	GALNT8	Q9NY28	637 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	OAZ3	Q9UMX2	235 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	CLTCL1	P53675	1640 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	ANKRD30A	Q9BXX3	1397 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	TMEM2	Q9UHN6	1383 aa		6.56	□□□□□ -1.36
MRPS11-208	ENST00000559557	FOXS1	O43638	330 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	CDC14B	O60729	498 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	CLASP2	O75122	1294 aa	Known RBP	6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	MEOX1	P50221	254 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	POLN	Q7Z5Q5	900 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	FAM89A	Q96GI7	184 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	ZDHHC5	Q9C0B5	715 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	PUF60	Q9UHX1	559 aa	Known RBP	6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	ANKRD50	Q9ULJ7	1429 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	NALCN	Q8IZF0	1738 aa		6.55	□□□□□ -1.36
MRPS11-208	ENST00000559557	COL16A1	Q07092	1604 aa	Predicted RBP	6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	NKTR	P30414	1462 aa	Known RBP	6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	KDM2B	Q8NHM5	1336 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	IFT172	Q9UG01	1749 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	DIP2A	Q14689	1571 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	RAD17	O75943	681 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	CRTAM	O95727	393 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	AOAH	P28039	575 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	RPS19	P39019	145 aa	Known RBP	6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	KCNQ1	P51787	676 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	JAM2	P57087	298 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	MRI	Q9BWK5	157 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	BTBD2	Q9BX70	525 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	CBLC	Q9ULV8	474 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	PTPN22	Q9Y2R2	807 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	MRPS23	Q9Y3D9	190 aa	Known RBP	6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	PCDHA9	Q9Y5H5	950 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	PPL	O60437	1756 aa		6.54	□□□□□ -1.36
MRPS11-208	ENST00000559557	SHPRH	Q149N8	1683 aa		6.53	□□□□□ -1.36
MRPS11-208	ENST00000559557	SUV39H1	O43463	412 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms