RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.47
SPG11-217ENST00000559511 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.47
SPG11-217ENST00000559511 CYP2J2P51589 502 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 HMGCS2P54868 508 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.47
SPG11-217ENST00000559511 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 MAEAQ7L5Y9 396 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 NEK9Q8TD19 979 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 C12orf42Q96LP6 360 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 GBP3Q9H0R5 595 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 DMAC2Q9NW81 257 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 FBXL5Q9UKA1 691 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.47
SPG11-217ENST00000559511 EIF2AK2P19525 551 aaKnown RBP12.08□□□□□ -0.48
SPG11-217ENST00000559511 MTMR1Q13613 665 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 CASP8Q14790 479 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 IQCEQ6IPM2 695 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 PDE11AQ9HCR9 933 aa12.08□□□□□ -0.48
SPG11-217ENST00000559511 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
SPG11-217ENST00000559511 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
SPG11-217ENST00000559511 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 P4HBP07237 508 aaKnown RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 FDX1P10109 184 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PRKCIP41743 596 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PLS1Q14651 629 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PGM5Q15124 567 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 CBWD6Q4V339 395 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 CBWD3Q5JTY5 395 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 CBWD5Q5RIA9 395 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 NOL9Q5SY16 702 aaKnown RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 STXBP4Q6ZWJ1 553 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 SAMD3Q8N6K7 520 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 SPATA4Q8NEY3 305 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 REPS2Q8NFH8 660 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 CTDP1Q9Y5B0 961 aaPredicted RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 PCDHGC5Q9Y5F6 944 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 C19orf81C9J6K1 198 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 K7ENM7 598 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 FTCDO95954 541 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 MYBL2P10244 700 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 FMO5P49326 533 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 RARRES1P49788 294 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 ITIH3Q06033 890 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PRKG1Q13976 671 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 UGCGQ16739 394 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 GSPT2Q8IYD1 628 aaKnown RBP12.07□□□□□ -0.48
SPG11-217ENST00000559511 HDAC7Q8WUI4 952 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 MS4A14Q96JA4 679 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 PNMA2Q9UL42 364 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 ADAMTS5Q9UNA0 930 aa12.07□□□□□ -0.48
SPG11-217ENST00000559511 GRID2IPA4D2P6 1211 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 TISP43B9A030 160 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 ATP9AO75110 1047 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 N4BP1O75113 896 aaKnown RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 MYCLP12524 364 aaPredicted RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 DSG3P32926 999 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 QARSP47897 775 aaKnown RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 SYCP3Q8IZU3 236 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPG11-217ENST00000559511 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 NAGPAQ9UK23 515 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 DBR1Q9UK59 544 aaKnown RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
SPG11-217ENST00000559511 FRMD4BQ9Y2L6 1034 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 AFG3L2Q9Y4W6 797 aa12.06□□□□□ -0.48
SPG11-217ENST00000559511 GFPT2O94808 682 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 MCM3P25205 808 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 MATR3P43243 847 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPG11-217ENST00000559511 DNA2P51530 1060 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 MRPS25P82663 173 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 MEI1Q5TIA1 1274 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 CCDC181Q5TID7 509 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 OLIG1Q8TAK6 271 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 RMDN3Q96TC7 470 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 PXMP2Q9NR77 195 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 RNF146Q9NTX7 359 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms