RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MYO1FO00160 1098 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 PIK3CDO00329 1044 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 NPR1P16066 1061 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
SPG11-215ENST00000559193 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 BTNL9Q6UXG8 535 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 OTOP1Q7RTM1 612 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 NLRP14Q86W24 1093 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 TPH2Q8IWU9 490 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 SLC35G2Q8TBE7 412 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 TUFT1Q9NNX1 390 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 AMFRQ9UKV5 643 aa18.03■□□□□ 0.48
SPG11-215ENST00000559193 FRMPD4Q14CM0 1322 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 DDX3YO15523 660 aaKnown RBP18.02■□□□□ 0.48
SPG11-215ENST00000559193 CHMP2AO43633 222 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 TMEM253P0C7T8 217 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 LMNB1P20700 586 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 POU5F1Q01860 360 aaKnown RBP18.02■□□□□ 0.48
SPG11-215ENST00000559193 DCAF12L1Q5VU92 463 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 CCT8L2Q96SF2 557 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 MKNK1Q9BUB5 465 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 PARVGQ9HBI0 331 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 PPP1R9AQ9ULJ8 1098 aa18.02■□□□□ 0.48
SPG11-215ENST00000559193 TTC7AQ9ULT0 858 aaPredicted RBP18.02■□□□□ 0.48
SPG11-215ENST00000559193 PPP1R12BO60237 982 aaPredicted RBP18.02■□□□□ 0.47
SPG11-215ENST00000559193 PSMD10O75832 226 aa18.02■□□□□ 0.47
SPG11-215ENST00000559193 HDLBPQ00341 1268 aaKnown RBP18.02■□□□□ 0.47
SPG11-215ENST00000559193 PPATQ06203 517 aa18.02■□□□□ 0.47
SPG11-215ENST00000559193 TMC3Q7Z5M5 1100 aa18.02■□□□□ 0.47
SPG11-215ENST00000559193 SPATS2Q86XZ4 545 aaKnown RBP18.02■□□□□ 0.47
SPG11-215ENST00000559193 UBLCP1Q8WVY7 318 aaPredicted RBP18.02■□□□□ 0.47
SPG11-215ENST00000559193 PRR12Q9ULL5 1215 aa18.02■□□□□ 0.47
SPG11-215ENST00000559193 NR2E1Q9Y466 385 aa18.02■□□□□ 0.47
SPG11-215ENST00000559193 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 GH2P01242 217 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 FGGP02679 453 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 TRIM49P0CI25 452 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 TRIM49CP0CI26 452 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 LRCH2Q5VUJ6 765 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 INTS2Q9H0H0 1204 aaKnown RBP18.01■□□□□ 0.47
SPG11-215ENST00000559193 SLC12A6Q9UHW9 1150 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 SRRM3A6NNA2 597 aaPredicted RBP18.01■□□□□ 0.47
SPG11-215ENST00000559193 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
SPG11-215ENST00000559193 ABCB4P21439 1286 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 CYP2J2P51589 502 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 MTMR3Q13615 1198 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
SPG11-215ENST00000559193 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 ARFGAP2Q8N6H7 521 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 DPH5Q9H2P9 285 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 AGPAT3Q9NRZ7 376 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 DMAC2Q9NW81 257 aa18.01■□□□□ 0.47
SPG11-215ENST00000559193 RBBP6Q7Z6E9 1792 aaKnown RBP18.01■□□□□ 0.47
SPG11-215ENST00000559193 FAM170AA1A519 330 aa18■□□□□ 0.47
SPG11-215ENST00000559193 PPP2R5CQ13362 524 aa18■□□□□ 0.47
SPG11-215ENST00000559193 ZNF720Q7Z2F6 126 aa18■□□□□ 0.47
SPG11-215ENST00000559193 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
SPG11-215ENST00000559193 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
SPG11-215ENST00000559193 TRIM51Q9BSJ1 452 aa18■□□□□ 0.47
SPG11-215ENST00000559193 WRAP73Q9P2S5 460 aaPredicted RBP18■□□□□ 0.47
SPG11-215ENST00000559193 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
SPG11-215ENST00000559193 UBE4BO95155 1302 aa18■□□□□ 0.47
SPG11-215ENST00000559193 FAM107AO95990 144 aa18■□□□□ 0.47
SPG11-215ENST00000559193 ZNF131P52739 623 aa18■□□□□ 0.47
SPG11-215ENST00000559193 BIRC3Q13489 604 aa18■□□□□ 0.47
SPG11-215ENST00000559193 ICE2Q659A1 982 aa18■□□□□ 0.47
SPG11-215ENST00000559193 PALB2Q86YC2 1186 aa18■□□□□ 0.47
SPG11-215ENST00000559193 CTNNBL1Q8WYA6 563 aaPredicted RBP18■□□□□ 0.47
SPG11-215ENST00000559193 SLC5A5Q92911 643 aa18■□□□□ 0.47
SPG11-215ENST00000559193 TAS2R14Q9NYV8 317 aa18■□□□□ 0.47
SPG11-215ENST00000559193 E7EVH7 732 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 UBAP1LF5GYI3 381 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
SPG11-215ENST00000559193 PLS1Q14651 629 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 DACT2Q5SW24 774 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 RUFY4Q6ZNE9 571 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 FAM114A2Q9NRY5 505 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 APEX2Q9UBZ4 518 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 KIAA0754O94854 1291 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 PPARDQ03181 441 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 AGBL2Q5U5Z8 902 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 FBXW10Q5XX13 1052 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 HS2ST1Q7LGA3 356 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 FAM178BQ8IXR5 827 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 SEL1LQ9UBV2 794 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 UTP11Q9Y3A2 253 aaKnown RBP17.99■□□□□ 0.47
SPG11-215ENST00000559193 SMCHD1A6NHR9 2005 aa17.99■□□□□ 0.47
SPG11-215ENST00000559193 CFBP00751 764 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 ALDH1B1P30837 517 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms