RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 NAT1P18440 290 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
LRRC28-209ENST00000558861 GTF2A2P52657 109 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 NLRX1Q86UT6 975 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 ZNF34Q8IZ26 560 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 Q8N1Y9 231 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 MYLIPQ8WY64 445 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 TMEM169Q96HH4 297 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 KCNJ15Q99712 375 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 JAM3Q9BX67 310 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 ACSL6Q9UKU0 697 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 COQ6Q9Y2Z9 468 aa7.54□□□□□ -1.2
LRRC28-209ENST00000558861 NRXN2Q9P2S2 1712 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 C22orf46C9J442 243 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 KPNA6O60684 536 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 MMP10P09238 476 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 STAT3P40763 770 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 ZCCHC8Q6NZY4 707 aaKnown RBP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 RNF180Q86T96 592 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 SIRT2Q8IXJ6 389 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 UBR7Q8N806 425 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 SHISA4Q96DD7 197 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 TRMT2BQ96GJ1 504 aaKnown RBP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 ZFP64Q9NPA5 681 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
LRRC28-209ENST00000558861 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 OAS3Q9Y6K5 1087 aaKnown RBP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 IBTKQ9P2D0 1353 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-209ENST00000558861 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.2
LRRC28-209ENST00000558861 PI4KAP2A4QPH2 592 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 FAM47E-STBD1D6RA91 191 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 H7BY64 318 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.21
LRRC28-209ENST00000558861 IGKV5-2P06315 115 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 CKMP06732 381 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 NEK4P51957 841 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 AIMP1Q12904 312 aaKnown RBP7.52□□□□□ -1.21
LRRC28-209ENST00000558861 TCIRG1Q13488 830 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 PTPROQ16827 1216 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 FYB2Q5VWT5 728 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 KSR2Q6VAB6 950 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 PI4KAP1Q8N8J0 262 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 IGSF22Q8N9C0 903 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 USP33Q8TEY7 942 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 CHAC2Q8WUX2 184 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 SPON1Q9HCB6 807 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 SAMD15Q9P1V8 674 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 COL4A3BPQ9Y5P4 624 aa7.52□□□□□ -1.21
LRRC28-209ENST00000558861 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 CARMIL3Q8ND23 1372 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 ABCC12Q96J65 1359 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 WNT9AO14904 365 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 BCAR3O75815 825 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 NTSR2O95665 410 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 APPP05067 770 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PYGMP11217 842 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 DNM2P50570 870 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 CYP4F8P98187 520 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PCBP1Q15365 356 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRRC28-209ENST00000558861 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PIK3R6Q5UE93 754 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PKN3Q6P5Z2 889 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 KIF6Q6ZMV9 814 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 KRT26Q7Z3Y9 468 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 LILRA2Q8N149 483 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PPM1KQ8N3J5 372 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 STK31Q9BXU1 1019 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 FAM126AQ9BYI3 521 aaPredicted RBP7.51□□□□□ -1.21
LRRC28-209ENST00000558861 TMX1Q9H3N1 280 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 MAPRE3Q9UPY8 281 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 X6R8D5 127 aa7.51□□□□□ -1.21
LRRC28-209ENST00000558861 PXDNLA1KZ92 1463 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 KLRG2A4D1S0 409 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 B4E1Z4 1266 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 POU3F2P20265 443 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 SDHBP21912 280 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CNGA1P29973 690 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 FLT3P36888 993 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 SEPT7Q16181 437 aaKnown RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 BEND3Q5T5X7 828 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 SUSD4Q5VX71 490 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CDCA2Q69YH5 1023 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 BICRALQ6AI39 1079 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 PRR5LQ6MZQ0 368 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 DDX53Q86TM3 631 aaKnown RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CISD2Q8N5K1 135 aaKnown RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 ABHD4Q8TB40 342 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 FBXW5Q969U6 566 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms