RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 C4orf19Q8IY42 314 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 SLC7A3Q8WY07 619 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 MTMR9Q96QG7 549 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 NOL7Q9UMY1 257 aaKnown RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 PCDHB7Q9Y5E2 793 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 UNC80Q8N2C7 3258 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 A0A087WZ62 844 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 IGKV6-21A0A0C4DH24 114 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 SLITRK3O94933 977 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 CSPG5O95196 566 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 DARSP14868 501 aaKnown RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 GPM6BQ13491 265 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 RC3H2Q9HBD1 1191 aaKnown RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 RGS18Q9NS28 235 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 THEGQ9P2T0 379 aa17.11■□□□□ 0.33
RPL28-207ENST00000558815 PRRC2BQ5JSZ5 2229 aaKnown RBP17.11■□□□□ 0.33
RPL28-207ENST00000558815 TRANK1O15050 2925 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 A0A087WWV3 80 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 DLL1O00548 723 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
RPL28-207ENST00000558815 POU3F3P20264 500 aaPredicted RBP17.1■□□□□ 0.33
RPL28-207ENST00000558815 GJB2P29033 226 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 TECP42680 631 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 MCM2P49736 904 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 ZNF710Q8N1W2 664 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 ZNF689Q96CS4 500 aaPredicted RBP17.1■□□□□ 0.33
RPL28-207ENST00000558815 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
RPL28-207ENST00000558815 REV3LO60673 3130 aa17.1■□□□□ 0.33
RPL28-207ENST00000558815 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
RPL28-207ENST00000558815 C9IYK1 514 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 H3BQV1 296 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 RFC5P40937 340 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 DSC3Q14574 896 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 EMC2Q15006 297 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
RPL28-207ENST00000558815 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
RPL28-207ENST00000558815 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
RPL28-207ENST00000558815 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 H3BNC9 293 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 FGFR1P11362 822 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
RPL28-207ENST00000558815 MTRQ99707 1265 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 HSD17B14Q9BPX1 270 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
RPL28-207ENST00000558815 ATP6V0A4Q9HBG4 840 aa17.08■□□□□ 0.32
RPL28-207ENST00000558815 SFPQP23246 707 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPL28-207ENST00000558815 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPL28-207ENST00000558815 BMPR1AP36894 532 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 CDC42EP1Q00587 391 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
RPL28-207ENST00000558815 PTPROQ16827 1216 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 CATSPER4Q7RTX7 472 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 CRIPAKQ8N1N5 446 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
RPL28-207ENST00000558815 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
RPL28-207ENST00000558815 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 LMCD1Q9NZU5 365 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
RPL28-207ENST00000558815 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 PPME1Q9Y570 386 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
RPL28-207ENST00000558815 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 MED24O75448 989 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 LINC00271P0C7V0 271 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 TFF2Q03403 129 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 LAMTOR4Q0VGL1 99 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 TWF2Q6IBS0 349 aaKnown RBP17.06■□□□□ 0.32
RPL28-207ENST00000558815 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
RPL28-207ENST00000558815 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
RPL28-207ENST00000558815 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
RPL28-207ENST00000558815 C11orf84Q9BUA3 381 aaPredicted RBP17.06■□□□□ 0.32
RPL28-207ENST00000558815 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms