RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 UBALD2Q8IYN6 164 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 RNF169Q8NCN4 708 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 NECTIN4Q96NY8 510 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 TBC1D22BQ9NU19 505 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 BARHL2Q9NY43 387 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 SORCS3Q9UPU3 1222 aa17.36■□□□□ 0.37
CPNE6-208ENST00000558795 MAGEB2O15479 319 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 PSAPP07602 524 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 TMOD1P28289 359 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 CLCN3P51790 818 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
CPNE6-208ENST00000558795 ITIH3Q06033 890 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
CPNE6-208ENST00000558795 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 RNF20Q5VTR2 975 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 ZNF746Q6NUN9 644 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-208ENST00000558795 SMAP1Q8IYB5 467 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-208ENST00000558795 RNF19AQ9NV58 838 aa17.35■□□□□ 0.37
CPNE6-208ENST00000558795 MAFBQ9Y5Q3 323 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-208ENST00000558795 IGLV3-22A0A075B6J6 115 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 GOLGA8AA7E2F4 631 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 GOLGA8BA8MQT2 603 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 SETQ01105 290 aaPredicted RBP17.34■□□□□ 0.37
CPNE6-208ENST00000558795 EFCAB12Q6NXP0 572 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 ECHDC2Q86YB7 292 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 FAM167AQ96KS9 214 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 SCLT1Q96NL6 688 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 ADAM7Q9H2U9 754 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 POMKQ9H5K3 350 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 GABBR1Q9UBS5 961 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 CDH22Q9UJ99 828 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 SAMM50Q9Y512 469 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 PCDHA10Q9Y5I2 948 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 HCFC2Q9Y5Z7 792 aa17.34■□□□□ 0.37
CPNE6-208ENST00000558795 C2CD4DB7Z1M9 353 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 GALR2O43603 387 aaPredicted RBP17.33■□□□□ 0.36
CPNE6-208ENST00000558795 CYP3A4P08684 503 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 EIF4BP23588 611 aaKnown RBP17.33■□□□□ 0.36
CPNE6-208ENST00000558795 MTHFRP42898 656 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 FUT2Q10981 343 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
CPNE6-208ENST00000558795 TMEM87AQ8NBN3 555 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
CPNE6-208ENST00000558795 MYO10Q9HD67 2058 aa17.33■□□□□ 0.36
CPNE6-208ENST00000558795 ZFHX2Q9C0A1 2572 aaPredicted RBP17.33■□□□□ 0.36
CPNE6-208ENST00000558795 C2orf71A6NGG8 1288 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 BRD1O95696 1058 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 ALDH7A1P49419 539 aaKnown RBP17.32■□□□□ 0.36
CPNE6-208ENST00000558795 CLLU1OSQ5K130 101 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 MCTP2Q6DN12 878 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 LRRC71Q8N4P6 559 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
CPNE6-208ENST00000558795 HELQQ8TDG4 1101 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 TMEM169Q96HH4 297 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 ZNF668Q96K58 619 aaPredicted RBP17.32■□□□□ 0.36
CPNE6-208ENST00000558795 TCEANC2Q96MN5 208 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 ADAMTS10Q9H324 1103 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
CPNE6-208ENST00000558795 PLXNA3P51805 1871 aa17.32■□□□□ 0.36
CPNE6-208ENST00000558795 WDR64B1ANS9 1081 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 CLASP2O75122 1294 aaKnown RBP17.31■□□□□ 0.36
CPNE6-208ENST00000558795 EOMESO95936 686 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPNE6-208ENST00000558795 RARS2Q5T160 578 aaKnown RBP17.31■□□□□ 0.36
CPNE6-208ENST00000558795 CRYGNQ8WXF5 182 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 UPF2Q9HAU5 1272 aaKnown RBP17.31■□□□□ 0.36
CPNE6-208ENST00000558795 C6orf50Q9HD87 102 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 NRBP2Q9NSY0 501 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 DZANK1Q9NVP4 752 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 WDR81Q562E7 1941 aa17.31■□□□□ 0.36
CPNE6-208ENST00000558795 A0A0U1RQF3 1178 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 NT5C1B-RDH14C9J2C7 533 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 PROB1E7EW31 1015 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 SEC24BO95487 1268 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 CXCL14O95715 111 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 OATP04181 439 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 WEE2P0C1S8 567 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 DARSP14868 501 aaKnown RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 HSPA4P34932 840 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 GPC3P51654 580 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 BCAR1P56945 870 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 PRR16Q569H4 304 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 TMEM105Q8N8V8 129 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 CCDC12Q8WUD4 166 aaPredicted RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
CPNE6-208ENST00000558795 DBR1Q9UK59 544 aaKnown RBP17.3■□□□□ 0.36
CPNE6-208ENST00000558795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-208ENST00000558795 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms