RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 THPOP40225 353 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 NT5C2P49902 561 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 HTRA4P83105 476 aaPredicted RBP11.2□□□□□ -0.62
SPG11-212ENST00000558790 KCNA1Q09470 495 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 LEXMQ3ZCV2 418 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 CCDC178Q5BJE1 867 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 CELF3Q5SZQ8 465 aaKnown RBP11.2□□□□□ -0.62
SPG11-212ENST00000558790 SERINC5Q86VE9 423 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 KCTD17Q8N5Z5 321 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 HSH2DQ96JZ2 352 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 INSL6Q9Y581 213 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 DNMT3AQ9Y6K1 912 aaPredicted RBP11.2□□□□□ -0.62
SPG11-212ENST00000558790 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 AMHP03971 560 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 HOXC8P31273 242 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 SP2Q02086 613 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 PGM5Q15124 567 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 RTN1Q16799 776 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 C16orf46Q6P387 395 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
SPG11-212ENST00000558790 DBF4BQ8NFT6 615 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 MRPL38Q96DV4 380 aaKnown RBP11.19□□□□□ -0.62
SPG11-212ENST00000558790 C16orf70Q9BSU1 422 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 AMNQ9BXJ7 453 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.19□□□□□ -0.623e-10■■■■■ 57.7
SPG11-212ENST00000558790 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
SPG11-212ENST00000558790 WDR81Q562E7 1941 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 RSPH10B2B2RC85 870 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 H3BQ06 376 aaPredicted RBP11.18□□□□□ -0.62
SPG11-212ENST00000558790 ZBTB5O15062 677 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 PPFIA4O75335 1185 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 LGALS2P05162 132 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 CTSHP09668 335 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 RSPH10BP0C881 870 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 EPC2Q52LR7 807 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 IFIT1BQ5T764 474 aaKnown RBP11.18□□□□□ -0.62
SPG11-212ENST00000558790 STOX1Q6ZVD7 989 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 ATP6V0A1Q93050 837 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 MYO19Q96H55 970 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 DIAPH3Q9NSV4 1193 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 MAD2L2Q9UI95 211 aa11.18□□□□□ -0.62
SPG11-212ENST00000558790 ACACBO00763 2458 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 FNDC1Q4ZHG4 1894 aaPredicted RBP11.17□□□□□ -0.62
SPG11-212ENST00000558790 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 C17orf102A2RUQ5 167 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 H3BRB1 525 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 TREHO43280 583 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 PPFIA3O75145 1194 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 THBS1P07996 1170 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 CCND2P30279 289 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 SEC23AQ15436 765 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 IMMTQ16891 758 aaKnown RBP11.17□□□□□ -0.62
SPG11-212ENST00000558790 TIGD5Q53EQ6 642 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 VSIG10LQ86VR7 867 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 PGBD3Q8N328 593 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 YME1L1Q96TA2 773 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 KRT23Q9C075 422 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 IL25Q9H293 177 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
SPG11-212ENST00000558790 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 PCDHA1Q9Y5I3 950 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 EVPLQ92817 2033 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
SPG11-212ENST00000558790 MAP1BP46821 2468 aaKnown RBP11.16□□□□□ -0.62
SPG11-212ENST00000558790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.16□□□□□ -0.62
SPG11-212ENST00000558790 TNFRSF10BO14763 440 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 ZP2Q05996 745 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 PTPROQ16827 1216 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 TCEAL5Q5H9L2 206 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 FAM26DQ5JW98 314 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 CYB5R4Q7L1T6 521 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 FCHSD1Q86WN1 690 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 SEPT8Q92599 483 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 MFSD14AQ96MC6 490 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 SAMD11Q96NU1 681 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 CNNM2Q9H8M5 875 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
SPG11-212ENST00000558790 MUTYHQ9UIF7 546 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 ATRXP46100 2492 aa11.16□□□□□ -0.62
SPG11-212ENST00000558790 MED19A0JLT2 244 aaPredicted RBP11.15□□□□□ -0.62
SPG11-212ENST00000558790 H3BNC9 293 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms