RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 NLRP7Q8WX94 980 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 SYMPKQ92797 1274 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PLIN2Q99541 437 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 FDXACB1Q9BRP7 624 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ZBED2Q9BTP6 218 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 CERS4Q9HA82 394 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ERVK-5Q9HDB9 667 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ANKEF1Q9NU02 776 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 MSRAQ9UJ68 235 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 KIAA1024Q9UPX6 916 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 GBF1Q92538 1859 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 AMHP03971 560 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 RPLP2P05387 115 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 CA3P07451 260 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PRPHP41219 470 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 EMC2Q15006 297 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 FOXD4L6Q3SYB3 417 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ZNF697Q5TEC3 545 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 FOXD4L3Q6VB84 417 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 ERMNQ8TAM6 284 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 SNX29Q8TEQ0 813 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 PRPF31Q8WWY3 499 aaKnown RBP15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 APBB2Q92870 758 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 SQORQ9Y6N5 450 aa15.43■□□□□ 0.06
TSPAN3-205ENST00000558745 MICAL3Q7RTP6 2002 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 E9PMD0 336 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 LAD1O00515 517 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 TLL1O43897 1013 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 USO1O60763 962 aaKnown RBP15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 GJB5O95377 273 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 MARCKSP29966 332 aaPredicted RBP15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 RFC5P40937 340 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 DNM2P50570 870 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 RAB30Q15771 203 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 KCNK18Q7Z418 384 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 USP38Q8NB14 1042 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 SLC7A3Q8WY07 619 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 TOP1MTQ969P6 601 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 GUCD1Q96NT3 240 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 MTRQ99707 1265 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 ZNF576Q9H609 170 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 GPRC5CQ9NQ84 441 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 PCDHA11Q9Y5I1 949 aa15.42■□□□□ 0.06
TSPAN3-205ENST00000558745 RFXAPO00287 272 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 EFCAB14O75071 495 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 DARSP14868 501 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 EIF4BP23588 611 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 PTPAQ15257 358 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 ASAP3Q8TDY4 903 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 PNMA5Q96PV4 448 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 USP28Q96RU2 1077 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 TFIP11Q9UBB9 837 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
TSPAN3-205ENST00000558745 MYO9BQ13459 2157 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 GPR182O15218 404 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 SPECC1Q5M775 1068 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 KRT79Q5XKE5 535 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 HAUS3Q68CZ6 603 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 CDX2Q99626 313 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 ADAM2Q99965 735 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 JPH2Q9BR39 696 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 GCOM2Q9BZD3 368 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 BHMT2Q9H2M3 363 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 MINDY3Q9H8M7 445 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 ATP6V0A4Q9HBG4 840 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 IFT122Q9HBG6 1241 aa15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 DAXXQ9UER7 740 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 DBR1Q9UK59 544 aaKnown RBP15.4■□□□□ 0.06
TSPAN3-205ENST00000558745 DGAT1O75907 488 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 ARL2P36404 184 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 GATMP50440 423 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 GRB10Q13322 594 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 DSC3Q14574 896 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 PPP2R2DQ66LE6 453 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 ARL6IP4Q66PJ3 421 aaKnown RBP15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 PSPC1Q8WXF1 523 aaKnown RBP15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 MYLIPQ8WY64 445 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 CLIC6Q96NY7 704 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 RAD9AQ99638 391 aa15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 POLR3FQ9H1D9 316 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 ZSCAN16Q9H4T2 348 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-205ENST00000558745 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms