RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 USP49Q70CQ1 688 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 PRPF31Q8WWY3 499 aaKnown RBP13.91□□□□□ -0.18
LRRC28-206ENST00000558471 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
LRRC28-206ENST00000558471 BHMT2Q9H2M3 363 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 ATP6V0A4Q9HBG4 840 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 DNM3Q9UQ16 869 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
LRRC28-206ENST00000558471 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 GBF1Q92538 1859 aa13.91□□□□□ -0.18
LRRC28-206ENST00000558471 A0A087WZ62 844 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 ARHGEF35A5YM69 484 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 GRXCR1A8MXD5 290 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 SOX1O00570 391 aaPredicted RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 GAS2O43903 313 aaKnown RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 PPP6R2O75170 966 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 RPS6KA5O75582 802 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 YEATS4O95619 227 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 EYA4O95677 639 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 ARL2P36404 184 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 CDC42EP1Q00587 391 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 MAEAQ7L5Y9 396 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 APBB2Q92870 758 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 FDXACB1Q9BRP7 624 aaPredicted RBP13.9□□□□□ -0.18
LRRC28-206ENST00000558471 CCSER1Q9C0I3 900 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 NT5C3AQ9H0P0 336 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
LRRC28-206ENST00000558471 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 ASAP2O43150 1006 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 SLC26A4O43511 780 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 EFCAB14O75071 495 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 CYP11B2P19099 503 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 EIF4BP23588 611 aaKnown RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 LAMTOR4Q0VGL1 99 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 NFX1Q12986 1120 aaKnown RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 PAK2Q13177 524 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 RTN4RL1Q86UN2 441 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-206ENST00000558471 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 KCTD17Q8N5Z5 321 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 LRRC15Q8TF66 581 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 TMX1Q9H3N1 280 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 ERVK-5Q9HDB9 667 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 GPRC5CQ9NQ84 441 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 RCOR1Q9UKL0 485 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 CFAP45Q9UL16 551 aa13.89□□□□□ -0.19
LRRC28-206ENST00000558471 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 ENPP3O14638 875 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 GPR182O15218 404 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 DARSP14868 501 aaKnown RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 ATP2A2P16615 1042 aaKnown RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 GLRA2P23416 452 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 ANP32AP39687 249 aaKnown RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 KCNJ6P48051 423 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 FXR1P51114 621 aaKnown RBP eCLIP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 NUCB2P80303 420 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 DEFB103AP81534 67 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 TMCO2Q7Z6W1 182 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 ZNF410Q86VK4 478 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 MCPH1Q8NEM0 835 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 SYMPKQ92797 1274 aaKnown RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 LRCH3Q96II8 777 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 GCOM2Q9BZD3 368 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-206ENST00000558471 IFT122Q9HBG6 1241 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 TTC3P53804 2025 aa13.88□□□□□ -0.19
LRRC28-206ENST00000558471 MYH11P35749 1972 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 PLCG1P19174 1290 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 FGFR4P22455 802 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 SLC12A3P55017 1021 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 SMAD3P84022 425 aaKnown RBP13.87□□□□□ -0.19
LRRC28-206ENST00000558471 MXD4Q14582 209 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-206ENST00000558471 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 RINT1Q6NUQ1 792 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 C1orf186Q6ZWK4 172 aa13.87□□□□□ -0.19
LRRC28-206ENST00000558471 SYT2Q8N9I0 419 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-206ENST00000558471 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms