RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 REXO1Q8N1G1 1221 aaKnown RBP12.09□□□□□ -0.47
SHF-203ENST00000558294 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
SHF-203ENST00000558294 C6orf50Q9HD87 102 aa12.09□□□□□ -0.47
SHF-203ENST00000558294 PUF60Q9UHX1 559 aaKnown RBP12.09□□□□□ -0.47
SHF-203ENST00000558294 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
SHF-203ENST00000558294 USP34Q70CQ2 3546 aa12.08□□□□□ -0.47
SHF-203ENST00000558294 ZNF862O60290 1169 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 CDC45O75419 566 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 HOXB8P17481 243 aaPredicted RBP12.08□□□□□ -0.48
SHF-203ENST00000558294 PPM1AP35813 382 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 PBX3P40426 434 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.48
SHF-203ENST00000558294 VCPP55072 806 aaKnown RBP12.08□□□□□ -0.48
SHF-203ENST00000558294 KRT32Q14532 448 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 PRR16Q569H4 304 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 CLLU1OSQ5K130 101 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 EFCAB12Q6NXP0 572 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
SHF-203ENST00000558294 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 MAP7D2Q96T17 732 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 APOL5Q9BWW9 433 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.48
SHF-203ENST00000558294 NID2Q14112 1375 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 WDR64B1ANS9 1081 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 EDIL3O43854 480 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 OATP04181 439 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 DARSP14868 501 aaKnown RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 TMOD1P28289 359 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 GNA11P29992 359 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 GPC3P51654 580 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 KRT17Q04695 432 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 ABI1Q8IZP0 508 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 SLC39A11Q8N1S5 342 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 ZNF668Q96K58 619 aaPredicted RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 SPG21Q9NZD8 308 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 CDH22Q9UJ99 828 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
SHF-203ENST00000558294 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
SHF-203ENST00000558294 A0A0U1RQF3 1178 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 C2orf71A6NGG8 1288 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 MSH4O15457 936 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 EOMESO95936 686 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 CPA1P15085 419 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 SP100P23497 879 aaPredicted RBP12.06□□□□□ -0.48
SHF-203ENST00000558294 AVPR2P30518 371 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 PRKCEQ02156 737 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 UGCGQ16739 394 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 Q6ZUG5 572 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 TMC7Q7Z402 723 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 MRPL43Q8N983 215 aaKnown RBP12.06□□□□□ -0.48
SHF-203ENST00000558294 RNF169Q8NCN4 708 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 HELQQ8TDG4 1101 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 CASP10Q92851 521 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 PHKBQ93100 1093 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 HCFC2Q9Y5Z7 792 aa12.06□□□□□ -0.48
SHF-203ENST00000558294 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
SHF-203ENST00000558294 FGFR4P22455 802 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 FGD1P98174 961 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 TARBP2Q15633 366 aaKnown RBP12.05□□□□□ -0.48
SHF-203ENST00000558294 NTRK3Q16288 839 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 TPRNQ4KMQ1 711 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 BICD2Q8TD16 824 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 SLC5A5Q92911 643 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 KCNB2Q92953 911 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 BRF1Q92994 677 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 RIPOR3Q96MK2 946 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 RIT2Q99578 217 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 MRPL9Q9BYD2 267 aaKnown RBP12.05□□□□□ -0.48
SHF-203ENST00000558294 ADAM7Q9H2U9 754 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 POMKQ9H5K3 350 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 NR2E1Q9Y466 385 aa12.05□□□□□ -0.48
SHF-203ENST00000558294 C2CD4DB7Z1M9 353 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 NT5C1B-RDH14C9J2C7 533 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 CHMP2AO43633 222 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 CLASP2O75122 1294 aaKnown RBP12.04□□□□□ -0.48
SHF-203ENST00000558294 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
SHF-203ENST00000558294 SFNP31947 248 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 USP11P51784 963 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 JAK3P52333 1124 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 BCAR1P56945 870 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 ITIH3Q06033 890 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 TBC1D8BQ0IIM8 1120 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 DRP2Q13474 957 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 CES5AQ6NT32 575 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
SHF-203ENST00000558294 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms