RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC35G1Q2M3R5 365 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 ZNF484Q5JVG2 852 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 RARS2Q5T160 578 aaKnown RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 ZC3H14Q6PJT7 736 aaKnown RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 PPFIBP1Q86W92 1011 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 KIAA2013Q8IYS2 634 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 LRRC43Q8N309 656 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 TRAPPC12Q8WVT3 735 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 ZBTB10Q96DT7 871 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 BORCS6Q96GS4 357 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 CASD1Q96PB1 797 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 PCYT2Q99447 389 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 HINFPQ9BQA5 517 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 LZTS2Q9BRK4 669 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SLC4A5Q9BY07 1137 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SMOC2Q9H3U7 446 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 CDHR5Q9HBB8 845 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 JPH1Q9HDC5 661 aaPredicted RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 IGSF9Q9P2J2 1179 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 WNT16Q9UBV4 365 aa5.92□□□□□ -1.46
SPG11-208ENST00000558155 SEC63Q9UGP8 760 aaKnown RBP5.92□□□□□ -1.46
SPG11-208ENST00000558155 ATG7O95352 703 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 WEE2P0C1S8 567 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 KIF5BP33176 963 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 ACTR2P61160 394 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 TROAPQ12815 778 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 DSC3Q14574 896 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 FAM160B1Q5W0V3 765 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 CWF19L1Q69YN2 538 aaKnown RBP5.91□□□□□ -1.46
SPG11-208ENST00000558155 LRRC55Q6ZSA7 311 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 CYB5R4Q7L1T6 521 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 CABP7Q86V35 215 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 SIX5Q8N196 739 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 SLC39A11Q8N1S5 342 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 C12orf76Q8N812 135 aaPredicted RBP5.91□□□□□ -1.46
SPG11-208ENST00000558155 CTCFLQ8NI51 663 aaPredicted RBP5.91□□□□□ -1.46
SPG11-208ENST00000558155 CYP2W1Q8TAV3 490 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 OXER1Q8TDS5 423 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 RUBCNQ92622 972 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 TMEM169Q96HH4 297 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 MAP3K14Q99558 947 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 MXRA8Q9BRK3 442 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 SPZ1Q9BXG8 430 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 KCNK12Q9HB15 430 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 CDH22Q9UJ99 828 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 PCDHA6Q9UN73 950 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 PCDHA8Q9Y5H6 950 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 NFASCO94856 1347 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 COL1A2P08123 1366 aa5.91□□□□□ -1.46
SPG11-208ENST00000558155 BACH1O14867 736 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 MAGEB2O15479 319 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 KRT37O76014 449 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 TMOD1P28289 359 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 ZNF76P36508 570 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 POLGP54098 1239 aaPredicted RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 BCAR1P56945 870 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 TBC1D8BQ0IIM8 1120 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 KIZQ2M2Z5 673 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 PDXDC2PQ6P474 469 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 CCDC149Q6ZUS6 474 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 RALYLQ86SE5 291 aaKnown RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 GPR149Q86SP6 731 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 DDX53Q86TM3 631 aaKnown RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 FAM228AQ86W67 206 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 ECHDC2Q86YB7 292 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 CKAP2LQ8IYA6 745 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 VPS52Q8N1B4 723 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 TMTC2Q8N394 836 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 METTL13Q8N6R0 699 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 GPR161Q8N6U8 529 aaKnown RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 RNF169Q8NCN4 708 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 NCOA7Q8NI08 942 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 SLC22A17Q8WUG5 538 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 TMEM40Q8WWA1 233 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 RSPH1Q8WYR4 309 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 NXPE3Q969Y0 559 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 CNTNAP3BQ96NU0 1288 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 OSMRQ99650 979 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 EMILIN2Q9BXX0 1053 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 MRPL9Q9BYD2 267 aaKnown RBP5.9□□□□□ -1.46
SPG11-208ENST00000558155 CNTNAP3Q9BZ76 1288 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 LNPKQ9C0E8 428 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 ZNF302Q9NR11 478 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 KCNH7Q9NS40 1196 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 DACT1Q9NYF0 836 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 DLL3Q9NYJ7 618 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 STK39Q9UEW8 545 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 DUSP12Q9UNI6 340 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 IRAK3Q9Y616 596 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 R4GN57 208 aa5.9□□□□□ -1.46
SPG11-208ENST00000558155 CACNA1BQ00975 2339 aa5.9□□□□□ -1.47
SPG11-208ENST00000558155 MYH9P35579 1960 aaKnown RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 EP300Q09472 2414 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 IGKV6D-21A0A0A0MT36 114 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 A0A0U1RQF3 1178 aa5.89□□□□□ -1.47
SPG11-208ENST00000558155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.89□□□□□ -1.47
SPG11-208ENST00000558155 NT5C1B-RDH14C9J2C7 533 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms