RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TET1Q8NFU7 2136 aa10□□□□□ -0.81
SPG11-207ENST00000558138 SIP14410 1827 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 A0A087WZ62 844 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 PP2D1A8MPX8 630 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 RBAK-RBAKDNI3L0D1 243 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ZBTB39O15060 712 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 GPR32O75388 356 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ERLIN2O94905 339 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 STBD1O95210 358 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 LYPLA2O95372 231 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 CA3P07451 260 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 STAG3L1P0CL83 205 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 MYOGP15173 224 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 MARCKSP29966 332 aaPredicted RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 CDC25AP30304 524 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 TXLNAP40222 546 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 UBA7P41226 1012 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 RARRES1P49788 294 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 DRP2Q13474 957 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 TFDP1Q14186 410 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 STK38Q15208 465 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 TCTN1Q2MV58 587 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ARL6IP4Q66PJ3 421 aaKnown RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 FAM173BQ6P4H8 233 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 CATSPER4Q7RTX7 472 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 CABP7Q86V35 215 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ZNF410Q86VK4 478 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 C4orf32Q8N8J7 132 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 RNF169Q8NCN4 708 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 FDXACB1Q9BRP7 624 aaPredicted RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 NT5C3AQ9H0P0 336 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 POLR3FQ9H1D9 316 aaPredicted RBP9.99□□□□□ -0.81
SPG11-207ENST00000558138 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ST3GAL5Q9UNP4 418 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 DNM3Q9UQ16 869 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 CLIC4Q9Y696 253 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 SQORQ9Y6N5 450 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 LOXHD1Q8IVV2 1947 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
SPG11-207ENST00000558138 ARID2Q68CP9 1835 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 LRRIQ4A6NIV6 560 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 ASAP2O43150 1006 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 SPATA31C1P0DKV0 1188 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 ZSCAN22P10073 491 aaPredicted RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPG11-207ENST00000558138 LIG1P18858 919 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 MUTP22033 750 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 FGFR4P22455 802 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 EIF4BP23588 611 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 PHKA2P46019 1235 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 NCBP1Q09161 790 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 LAMTOR4Q0VGL1 99 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 MXD4Q14582 209 aaPredicted RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 PADI6Q6TGC4 694 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 FAM228AQ86W67 206 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 KSR1Q8IVT5 923 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 IGSF22Q8N9C0 903 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 MCPH1Q8NEM0 835 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 TMEM40Q8WWA1 233 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 PRPF31Q8WWY3 499 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 VWCEQ96DN2 955 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 RAD9AQ99638 391 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 ADAM2Q99965 735 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 BHMT2Q9H2M3 363 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 ADAMTS10Q9H324 1103 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 ZNF576Q9H609 170 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 DHX33Q9H6R0 707 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 DBR1Q9UK59 544 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 PIN4Q9Y237 131 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 YBX2Q9Y2T7 364 aaKnown RBP9.98□□□□□ -0.81
SPG11-207ENST00000558138 PCDHB7Q9Y5E2 793 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 GBF1Q92538 1859 aa9.98□□□□□ -0.81
SPG11-207ENST00000558138 TMEM265A0A087WTH1 108 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 IGKV6-21A0A0C4DH24 114 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 E9PMD0 336 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 INO80B-WBP1J3KQ70 363 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 ENPP3O14638 875 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 CSDE1O75534 798 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 GJB5O95377 273 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 F13A1P00488 732 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 KRT18P05783 430 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 DARSP14868 501 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 LONP1P36776 959 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 IL17AQ16552 155 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 SPOUT1Q5T280 376 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 TWF2Q6IBS0 349 aaKnown RBP9.97□□□□□ -0.81
SPG11-207ENST00000558138 ZBTB8OSQ8IWT0 167 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 LINC01465Q8N7H1 131 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 ARNTL2Q8WYA1 636 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 IFT74Q96LB3 600 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 AK8Q96MA6 479 aa9.97□□□□□ -0.81
SPG11-207ENST00000558138 GAS2L1Q99501 681 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms