RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 OSMRQ99650 979 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 MRPL9Q9BYD2 267 aaKnown RBP11.89□□□□□ -0.51
TRAV33-201ENST00000557514 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 FBXO4Q9UKT5 387 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 UBIAD1Q9Y5Z9 338 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 KLRC1P26715 233 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 SLC26A2P50443 739 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 CRYBB1P53674 252 aaPredicted RBP11.88□□□□□ -0.51
TRAV33-201ENST00000557514 BCAR1P56945 870 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 ACTR2P61160 394 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAV33-201ENST00000557514 PTPN14Q15678 1187 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 C20orf194Q5TEA3 1177 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 ZBTB44Q8NCP5 570 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 CUL5Q93034 780 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 NXPE3Q969Y0 559 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 RHOBTB2Q9BYZ6 727 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 FOXQ1Q9C009 403 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 SLC9A2Q9UBY0 812 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 LOXHD1Q8IVV2 1947 aa11.88□□□□□ -0.51
TRAV33-201ENST00000557514 ZBTB42B2RXF5 422 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 MAFGO15525 162 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 STAT5BP51692 787 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 CLCN4P51793 760 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 WTAPQ15007 396 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 ACAP1Q15027 740 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 PPM1JQ5JR12 505 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 DDX53Q86TM3 631 aaKnown RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 BCL7CQ8WUZ0 217 aaPredicted RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 SECISBP2LQ93073 1101 aaKnown RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 VN1R3Q9BXE9 311 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 KRT23Q9C075 422 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 WDR6Q9NNW5 1121 aaKnown RBP11.87□□□□□ -0.51
TRAV33-201ENST00000557514 PARD6AQ9NPB6 346 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 COL1A2P08123 1366 aa11.87□□□□□ -0.51
TRAV33-201ENST00000557514 CLUHO75153 1309 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 FANCMQ8IYD8 2048 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 CARNS1A5YM72 827 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 HBP1O60381 514 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 LILRB5O75023 590 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 LRRN2O75325 713 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 GPR32O75388 356 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
TRAV33-201ENST00000557514 STARD6P59095 220 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 DCLRE1AQ6PJP8 1040 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 HELQQ8TDG4 1101 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 RSPH1Q8WYR4 309 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 STAMQ92783 540 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 NELL1Q92832 810 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 IGSF21Q96ID5 467 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 MYADMQ96S97 322 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 NFASCO94856 1347 aa11.86□□□□□ -0.51
TRAV33-201ENST00000557514 DOCK5Q9H7D0 1870 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 CACNA1IQ9P0X4 2223 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 IGKV6D-21A0A0A0MT36 114 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 SLC30A4O14863 429 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 LAMTOR5O43504 91 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAV33-201ENST00000557514 C22orf31O95567 290 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
TRAV33-201ENST00000557514 PDE1AP54750 535 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 TROAPQ12815 778 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 HTR4Q13639 388 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 RNF169Q8NCN4 708 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 NETO1Q8TDF5 533 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 DDX23Q9BUQ8 820 aaKnown RBP11.85□□□□□ -0.51
TRAV33-201ENST00000557514 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 ZSCAN32Q9NX65 697 aa11.85□□□□□ -0.51
TRAV33-201ENST00000557514 LAMA4Q16363 1823 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 ANHXE9PGG2 379 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 ATG7O95352 703 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 PAPLNO95428 1278 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 VTNP04004 478 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 DMWDQ09019 674 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 ITGB3BPQ13352 177 aaPredicted RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 IMMTQ16891 758 aaKnown RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 CYB5R4Q7L1T6 521 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 KLHL5Q96PQ7 755 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 SDF4Q9BRK5 362 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 BCO2Q9BYV7 579 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms