RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SHKBP1Q8TBC3 707 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 WDR89Q96FK6 387 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-247ENST00000557311 OSBPL1AQ9BXW6 950 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 FAM105AQ9NUU6 356 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 PCMTD2Q9NV79 361 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 PARP2Q9UGN5 583 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 PPM1HQ9ULR3 514 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 MTCH2Q9Y6C9 303 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 PTPRFP10586 1907 aa5.82□□□□□ -1.48
ATXN3-247ENST00000557311 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 CDH23Q9H251 3354 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 CACNA1FO60840 1977 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 MYADML2A6NDP7 307 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 PRR33A8MZF0 331 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 RFXAPO00287 272 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 VWA5AO00534 786 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 WDR46O15213 610 aaKnown RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 GNAI2P04899 355 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 CELA3AP09093 270 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 MYOGP15173 224 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 ATP2A2P16615 1042 aaKnown RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 GRIK1P39086 918 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 NKX3-2P78367 333 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 SLFN5Q08AF3 891 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 ACVR2BQ13705 512 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 COL19A1Q14993 1142 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 TNNI3KQ59H18 835 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 AXDND1Q5T1B0 1012 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 LLGL2Q6P1M3 1020 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 MAGEB6Q8N7X4 407 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 SNX27Q96L92 541 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 UPF3AQ9H1J1 476 aaKnown RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 ATXN3LQ9H3M9 355 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 ABHD16BQ9H3Z7 469 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 HIPK3Q9H422 1215 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 VCPKMTQ9H867 229 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 RNF19AQ9NV58 838 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 MCM9Q9NXL9 1143 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 VTI1BQ9UEU0 232 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-247ENST00000557311 PPP1R9AQ9ULJ8 1098 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 FPGT-TNNI3KV9GXZ4 949 aa5.81□□□□□ -1.48
ATXN3-247ENST00000557311 LAMA2P24043 3122 aaKnown RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 DNAJC25-GNG10A0A024R161 153 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 FAM86C2PA6NEL3 165 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 KIF28PB7ZC32 967 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ZNF862O60290 1169 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ZEB2O60315 1214 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 PAGE1O75459 146 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 TGFB1P01137 390 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 PFKMP08237 780 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ALADP13716 330 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 MRE11P49959 708 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 CCL23P55773 120 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ICA1Q05084 483 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 NPAS4Q8IUM7 802 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 GRIN3AQ8TCU5 1115 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 STK35Q8TDR2 534 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 GPBAR1Q8TDU6 330 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ELMO3Q96BJ8 720 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 TEX13BQ9BXU2 312 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 CRNKL1Q9BZJ0 848 aaKnown RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 PRDM4Q9UKN5 801 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 PCDHA4Q9UN74 947 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 NOP58Q9Y2X3 529 aaKnown RBP5.8□□□□□ -1.48
ATXN3-247ENST00000557311 AK5Q9Y6K8 562 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
ATXN3-247ENST00000557311 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 ENC1O14682 589 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 CTAGE5O15320 804 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 TMPRSS2O15393 492 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 ANP32CO43423 234 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 CA3P07451 260 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 SUPT20HL2P0C7V6 817 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 ACTN1P12814 892 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 CD97P48960 835 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 TNFAIP2Q03169 654 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 OS9Q13438 667 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-247ENST00000557311 PCNX4Q63HM2 1172 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms