RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 PSPC1Q8WXF1 523 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 SCLT1Q96NL6 688 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 MTRQ99707 1265 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 GCOM2Q9BZD3 368 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 INO80BQ9C086 356 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 AGO3Q9H9G7 860 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 ERVK-5Q9HDB9 667 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 SUCLA2Q9P2R7 463 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 PADI3Q9ULW8 664 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 GINS2Q9Y248 185 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
MTHFD1-214ENST00000556771 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 VWA3AA6NCI4 1184 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 GJB5O95377 273 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 DARSP14868 501 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 EIF4BP23588 611 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 CD52P31358 61 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 DEFB103AP81534 67 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 IL17AQ16552 155 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 TCTN1Q2MV58 587 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 PIGOQ8TEQ8 1089 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 TIFAQ96CG3 184 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 OSMRQ99650 979 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 SH2D3AQ9BRG2 576 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 PBX4Q9BYU1 374 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 OSBPL7Q9BZF2 842 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 C1orf112Q9NSG2 853 aa11.76□□□□□ -0.53
MTHFD1-214ENST00000556771 GRXCR1A8MXD5 290 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ZBTB39O15060 712 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 MAP3K13O43283 966 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 TLL1O43897 1013 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 POU5F1BQ06416 359 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 NFX1Q12986 1120 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 DRP2Q13474 957 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 TFDP1Q14186 410 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 PCBP1Q15365 356 aaKnown RBP eCLIP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 HYIQ5T013 277 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 TMEM40Q8WWA1 233 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ZNF396Q96N95 335 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 RAD9AQ99638 391 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 SLC28A3Q9HAS3 691 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 ST3GAL5Q9UNP4 418 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 DNM3Q9UQ16 869 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
MTHFD1-214ENST00000556771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 ENPP3O14638 875 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 EYA4O95677 639 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 F13A1P00488 732 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 LAMTOR4Q0VGL1 99 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 PTPAQ15257 358 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 DEFB123Q8N688 67 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 PRPF31Q8WWY3 499 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 TOP1MTQ969P6 601 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 PPP1R16BQ96T49 567 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 DDX19AQ9NUU7 478 aaKnown RBP11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 INSL6Q9Y581 213 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 COL4A6Q14031 1691 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 PTPRSQ13332 1948 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 TTC3P53804 2025 aa11.74□□□□□ -0.53
MTHFD1-214ENST00000556771 A0A087WZ62 844 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 PP2D1A8MPX8 630 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 CYP11B2P19099 503 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 ARL2P36404 184 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 PBX2P40425 430 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 UBA7P41226 1012 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 PHKA2P46019 1235 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 PSEN1P49768 467 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 RABGGTBP53611 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms