RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 BTG3Q14201 252 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 SLC24A5Q71RS6 500 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 ATXN2LQ8WWM7 1075 aaKnown RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 EIF2AK1Q9BQI3 630 aaKnown RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 DHX33Q9H6R0 707 aaKnown RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 C1orf112Q9NSG2 853 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 RNF19AQ9NV58 838 aa11.57□□□□□ -0.56
SHMT2-224ENST00000556737 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-224ENST00000556737 A0A087WZ62 844 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 DENND3A2RUS2 1198 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 POTEMA6NI47 508 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 ZBTB39O15060 712 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 SLITRK3O94933 977 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 LYPLA2O95372 231 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 STAG3L1P0CL83 205 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 YWHABP31946 246 aaKnown RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 BMPR1AP36894 532 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 FAM189BP81408 668 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 TFF2Q03403 129 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 GPM6BQ13491 265 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 CTTNQ14247 550 aaKnown RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 PAN2Q504Q3 1202 aaKnown RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 ODR4Q5SWX8 454 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 NOSTRINQ8IVI9 506 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 ASB2Q96Q27 587 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 HSD17B14Q9BPX1 270 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 FDXACB1Q9BRP7 624 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-224ENST00000556737 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 RWDD3Q9Y3V2 267 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
SHMT2-224ENST00000556737 GRM6O15303 877 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ST18O60284 1047 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 MARCH6O60337 910 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 DKC1O60832 514 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 CSDE1O75534 798 aaKnown RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 FGFR1P11362 822 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ATF7P17544 494 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 U2AF2P26368 475 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 MCM7P33993 719 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 RFC5P40937 340 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 TXKP42681 527 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 NBR1Q14596 966 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 EMC2Q15006 297 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ZNF410Q86VK4 478 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 KSR1Q8IVT5 923 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 FAM184AQ8NB25 1140 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 NEK9Q8TD19 979 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 CEP170P1Q96L14 293 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 SCLT1Q96NL6 688 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 JPH2Q9BR39 696 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ELAC1Q9H777 363 aaKnown RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 ZSWIM4Q9H7M6 989 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 XPNPEP1Q9NQW7 623 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 TMEM161AQ9NX61 479 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 SUCLA2Q9P2R7 463 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-224ENST00000556737 PCDHA12Q9UN75 941 aa11.55□□□□□ -0.56
SHMT2-224ENST00000556737 TTC28Q96AY4 2481 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 BRWD1Q9NSI6 2320 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 RB1P06400 928 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 IBSPP21815 317 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 DNAJB1P25685 340 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 TOB1P50616 345 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 POLGP54098 1239 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 CAMK1Q14012 370 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 BECN1Q14457 450 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 COL19A1Q14993 1142 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 SKIV2LQ15477 1246 aaKnown RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 RHPN2Q8IUC4 686 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 C4orf32Q8N8J7 132 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 SLC7A3Q8WY07 619 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 P2RX5Q93086 422 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 C11orf84Q9BUA3 381 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 GCOM2Q9BZD3 368 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-224ENST00000556737 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 PCDHB7Q9Y5E2 793 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 COL4A3BPQ9Y5P4 624 aa11.54□□□□□ -0.56
SHMT2-224ENST00000556737 TBKBP1A7MCY6 615 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
SHMT2-224ENST00000556737 ITGB1P05556 798 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 OR52Z1P0C646 297 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms