RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 KAZNQ674X7 775 aa16.49■□□□□ 0.23
LRP1-211ENST00000556356 HDXQ7Z353 690 aa16.49■□□□□ 0.23
LRP1-211ENST00000556356 ERICH1Q86X53 443 aa16.49■□□□□ 0.23
LRP1-211ENST00000556356 SAAL1Q96ER3 474 aa16.49■□□□□ 0.23
LRP1-211ENST00000556356 ZMYND15Q9H091 742 aa16.49■□□□□ 0.23
LRP1-211ENST00000556356 H7C0C1 242 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 ATP5OP48047 213 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 KCTD17Q8N5Z5 321 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 PGBD4Q96DM1 585 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 KIF2CQ99661 725 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
LRP1-211ENST00000556356 POLIQ9UNA4 740 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 CYP2C9P11712 490 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
LRP1-211ENST00000556356 CIITAP33076 1130 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 ZNF560Q96MR9 790 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 PPATQ06203 517 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 VSTM4Q8IW00 320 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 SLITRK6Q9H5Y7 841 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
LRP1-211ENST00000556356 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
LRP1-211ENST00000556356 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
LRP1-211ENST00000556356 DSG3P32926 999 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 HERVK_113P62684 666 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 MRC1P22897 1456 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 KCNB1Q14721 858 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 KRT39Q6A163 491 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 CCDC170Q8IYT3 715 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 KRT222Q8N1A0 295 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 SMC1BQ8NDV3 1235 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 EIF4A3P38919 411 aaKnown RBP16.47■□□□□ 0.23
LRP1-211ENST00000556356 EHHADHQ08426 723 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 KCNH2Q12809 1159 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 SCN4BQ8IWT1 228 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 ZNF148Q9UQR1 794 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRP1-211ENST00000556356 ADCY8P40145 1251 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 DUOXA2Q1HG44 320 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
LRP1-211ENST00000556356 PIK3C2AO00443 1686 aa16.47■□□□□ 0.23
LRP1-211ENST00000556356 MON2Q7Z3U7 1717 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 PRPSAP1Q14558 356 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 ZNF394Q53GI3 561 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 CFAP157Q5JU67 520 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 SPATC1LQ9H0A9 340 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 RPS6KA5O75582 802 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 NMT1P30419 496 aaKnown RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 SLC12A2P55011 1212 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 ARL13BQ3SXY8 428 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 TMEM35BQ8NCS4 154 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 PDXKO00764 312 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 PRPSAP2O60256 369 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 PLS3P13797 630 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 FDPSP14324 419 aaKnown RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 XPAP23025 273 aaPredicted RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 ZBTB16Q05516 673 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 EIF3CQ99613 913 aaKnown RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 SH2D3AQ9BRG2 576 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 ANKEF1Q9NU02 776 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 GAKO14976 1311 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 PGK2P07205 417 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
LRP1-211ENST00000556356 VPS37BQ9H9H4 285 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 SCINQ9Y6U3 715 aa16.46■□□□□ 0.23
LRP1-211ENST00000556356 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 CRCPO75575 148 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 SEC23AQ15436 765 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 CCT6BQ92526 530 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 RAB3IL1Q8TBN0 382 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 CEP72Q9P209 647 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 IRX5P78411 483 aaPredicted RBP16.45■□□□□ 0.22
LRP1-211ENST00000556356 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 SRGAP1Q7Z6B7 1085 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
LRP1-211ENST00000556356 KRT1P04264 644 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 RPA1P27694 616 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRP1-211ENST00000556356 LMNB2Q03252 620 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 GEN1Q17RS7 908 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 C6orf163Q5TEZ5 329 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 PLA2G4FQ68DD2 849 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 KCNB2Q92953 911 aa16.45■□□□□ 0.22
LRP1-211ENST00000556356 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
LRP1-211ENST00000556356 TRAPPC3O43617 180 aa16.44■□□□□ 0.22
LRP1-211ENST00000556356 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
LRP1-211ENST00000556356 ACTR2P61160 394 aa16.44■□□□□ 0.22
LRP1-211ENST00000556356 GOLGA8FQ08AF8 430 aa16.44■□□□□ 0.22
LRP1-211ENST00000556356 GOLGA8DPQ0D2H9 430 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms