RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CATIPQ7Z7H3 387 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 RALYLQ86SE5 291 aaKnown RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 RTN4RL1Q86UN2 441 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 CHD1LQ86WJ1 897 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 ZNF454Q8N9F8 522 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 SEPT1Q8WYJ6 367 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 TATDN2Q93075 761 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 GPRASP2Q96D09 838 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 RRP36Q96EU6 259 aaKnown RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 CDHR1Q96JP9 859 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 PHF7Q9BWX1 381 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 FTHL17Q9BXU8 183 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 IL25Q9H293 177 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 OSBPL3Q9H4L5 887 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 SMARCAD1Q9H4L7 1026 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 ZSWIM4Q9H7M6 989 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 TLE6Q9H808 572 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 SEC63Q9UGP8 760 aaKnown RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 FKBPLQ9UIM3 349 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 PADI3Q9ULW8 664 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 TRPV2Q9Y5S1 764 aa6.67□□□□□ -1.34
PRKCH-220ENST00000556164 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-220ENST00000556164 RRN3P2A6NIE6 340 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 MEIS2O14770 477 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 PER2O15055 1255 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 RPLP2P05387 115 aaKnown RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 INSRRP14616 1297 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 SP100P23497 879 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 VCPP55072 806 aaKnown RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 RBM10P98175 930 aaKnown RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 ARID5AQ03989 594 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 TROAPQ12815 778 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 MTMR1Q13613 665 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 CBX2Q14781 532 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 TMC7Q7Z402 723 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 ZBTB33Q86T24 672 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 SMC5Q8IY18 1101 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 EXOC8Q8IYI6 725 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 CTCFLQ8NI51 663 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 TRAPPC12Q8WVT3 735 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 ATOH1Q92858 354 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 COL26A1Q96A83 441 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 NEK1Q96PY6 1258 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 MYL10Q9BUA6 226 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 OSBPL2Q9H1P3 480 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 RWDD1Q9H446 243 aaPredicted RBP6.66□□□□□ -1.34
PRKCH-220ENST00000556164 AZI2Q9H6S1 392 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 TLR9Q9NR96 1032 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 PCDHB12Q9Y5F1 795 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 IGSF9BQ9UPX0 1349 aa6.66□□□□□ -1.34
PRKCH-220ENST00000556164 FSD2A1L4K1 749 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 DENND3A2RUS2 1198 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SPDYE3A6NKU9 549 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 TBKBP1A7MCY6 615 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 E7EWF7 191 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 CYP21A2P08686 494 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SRGAP2BP0DMP2 458 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 ATF7P17544 494 aaPredicted RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 ITGB5P18084 799 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 KIF5BP33176 963 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SARSP49591 514 aaKnown RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 DAB2P98082 770 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 KRT76Q01546 638 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 NUCB1Q02818 461 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 UBE3AQ05086 875 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 TCEAL1Q15170 157 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 UBE2SQ16763 222 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 PTPN21Q16825 1174 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 DUSP6Q16828 381 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 TMEM266Q2M3C6 531 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 PLPP4Q5VZY2 271 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 LYPD8Q6UX82 237 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 RETREG3Q86VR2 466 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 THNSL1Q8IYQ7 743 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 CRIPAKQ8N1N5 446 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 VN1R2Q8NFZ6 395 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 NCOA7Q8NI08 942 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SUSD6Q92537 303 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 ASIC4Q96FT7 647 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 CDCA3Q99618 268 aaPredicted RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 APOL5Q9BWW9 433 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SPZ1Q9BXG8 430 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 IRF2BPLQ9H1B7 796 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 PSTPIP2Q9H939 334 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 PRDM16Q9HAZ2 1276 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 AAASQ9NRG9 546 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 KLHL42Q9P2K6 505 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SLC9A2Q9UBY0 812 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 GINS2Q9Y248 185 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.34
PRKCH-220ENST00000556164 PCDHB7Q9Y5E2 793 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms