RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SLC38A3Q99624 504 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 TACO1Q9BSH4 297 aaKnown RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 PITHD1Q9GZP4 211 aaPredicted RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 POFUT1Q9H488 388 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 METTL14Q9HCE5 456 aaKnown RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 KCNG1Q9UIX4 513 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 TMPRSS11EQ9UL52 423 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 DENND2AQ9ULE3 1009 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 KCTD3Q9Y597 815 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 PPP2R3BQ9Y5P8 575 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 PREX1Q8TCU6 1659 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ADAMTS20P59510 1910 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 SH3D21A4FU49 640 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 GOLGA8AA7E2F4 631 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 GOLGA8BA8MQT2 603 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 FZD9O00144 591 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 TOM1O60784 492 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ALDH1L1O75891 902 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ZNF28P17035 718 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 PI3P19957 117 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ENPP1P22413 925 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 GLRBP48167 497 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ADCY2Q08462 1091 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 NFATC3Q12968 1075 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 SMAD4Q13485 552 aaKnown RBP4.54□□□□□ -1.68
SRP54-209ENST00000555746 ZNF385BQ569K4 471 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 PRAMEF9Q5VWM5 478 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 CMIPQ8IY22 773 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 STPG3Q8N7X2 389 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 C1orf162Q8NEQ5 155 aaPredicted RBP4.54□□□□□ -1.68
SRP54-209ENST00000555746 RSAD2Q8WXG1 361 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 ZCCHC14Q8WYQ9 949 aaKnown RBP4.54□□□□□ -1.68
SRP54-209ENST00000555746 RPGRQ92834 1020 aaKnown RBP4.54□□□□□ -1.68
SRP54-209ENST00000555746 DACT3Q96B18 629 aaPredicted RBP4.54□□□□□ -1.68
SRP54-209ENST00000555746 PWWP2AQ96N64 755 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 SLC13A1Q9BZW2 595 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 HAPLN2Q9GZV7 340 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 FBXO10Q9UK96 956 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 NUMBLQ9Y6R0 609 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 GRIN2AQ12879 1464 aa4.54□□□□□ -1.68
SRP54-209ENST00000555746 TNKSO95271 1327 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 MYPNQ86TC9 1320 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 A0A0A6YYJ9 748 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 SHTN1A0MZ66 631 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 PRSS38A1L453 326 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 RFXAPO00287 272 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 MAFGO15525 162 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 CFBP00751 764 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 S100BP04271 92 aaPredicted RBP4.53□□□□□ -1.68
SRP54-209ENST00000555746 PFKMP08237 780 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 RBP3P10745 1247 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 NEK2P51955 445 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 MLLT6P55198 1093 aaPredicted RBP4.53□□□□□ -1.68
SRP54-209ENST00000555746 SCAND1P57086 179 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 LINC00310P59036 64 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 NOLC1Q14978 699 aaKnown RBP eCLIP4.53□□□□□ -1.68
SRP54-209ENST00000555746 TTF1Q15361 905 aaPredicted RBP4.53□□□□□ -1.68
SRP54-209ENST00000555746 KCNA10Q16322 511 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 ODR4Q5SWX8 454 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 ZNF648Q5T619 568 aaPredicted RBP4.53□□□□□ -1.68
SRP54-209ENST00000555746 PHF19Q5T6S3 580 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 UNQ6494/PRO21346Q6UXR6 183 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 SLC41A1Q8IVJ1 513 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 FERMT2Q96AC1 680 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 CHMP4CQ96CF2 233 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 FUBP3Q96I24 572 aaKnown RBP eCLIP4.53□□□□□ -1.68
SRP54-209ENST00000555746 ANO3Q9BYT9 981 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 KCMF1Q9P0J7 381 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 CROTQ9UKG9 612 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 THRAP3Q9Y2W1 955 aaKnown RBP4.53□□□□□ -1.68
SRP54-209ENST00000555746 PBRM1Q86U86 1689 aa4.53□□□□□ -1.68
SRP54-209ENST00000555746 ST20-MTHFSA0A0A6YYL1 179 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 H0Y858 1186 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 EIF5BO60841 1220 aaKnown RBP4.52□□□□□ -1.69
SRP54-209ENST00000555746 OPHN1O60890 802 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 KLHL18O94889 574 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 IL13P35225 146 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 IARSP41252 1262 aaKnown RBP4.52□□□□□ -1.69
SRP54-209ENST00000555746 GPR15P49685 360 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 EPHB1P54762 984 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 MRPS9P82933 396 aaKnown RBP4.52□□□□□ -1.69
SRP54-209ENST00000555746 CD83Q01151 205 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 MCL1Q07820 350 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 MAP3K12Q12852 859 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 CCDC178Q5BJE1 867 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 CT83Q5H943 113 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 PITRM1Q5JRX3 1037 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 GRAMD4Q6IC98 578 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 TTLL7Q6ZT98 887 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 KCNK18Q7Z418 384 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 BMP8AQ7Z5Y6 402 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 LYSMD2Q8IV50 215 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
SRP54-209ENST00000555746 WDR48Q8TAF3 677 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 SSH1Q8WYL5 1049 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 RAX2Q96IS3 184 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 MTG2Q9H4K7 406 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms