RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 GRB10Q13322 594 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 NBR1Q14596 966 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 SLC39A14Q15043 492 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 ZNF174Q15697 407 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 CALCRLQ16602 461 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 TMEM266Q2M3C6 531 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 EFCAB12Q6NXP0 572 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 ANO5Q75V66 913 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 RTN4RL1Q86UN2 441 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-215ENST00000555616 FAM228AQ86W67 206 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 NPAS4Q8IUM7 802 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 LRRC71Q8N4P6 559 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 LINC00301Q8NCQ3 95 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 GDPD5Q8WTR4 605 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 CHAMP1Q96JM3 812 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 SAMD11Q96NU1 681 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 OSMRQ99650 979 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 CDHR5Q9HBB8 845 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
ACTN1-215ENST00000555616 WRAP73Q9P2S5 460 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-215ENST00000555616 RCOR1Q9UKL0 485 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 GINS2Q9Y248 185 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 PPME1Q9Y570 386 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
ACTN1-215ENST00000555616 MORC2Q9Y6X9 1032 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-215ENST00000555616 GPR182O15218 404 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-215ENST00000555616 DKC1O60832 514 aaKnown RBP eCLIP10.75□□□□□ -0.691e-7■■■■■ 54.2
ACTN1-215ENST00000555616 PPP6R2O75170 966 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 RPS6KA5O75582 802 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 DGKIO75912 1065 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 UPP2O95045 317 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 P4HBP07237 508 aaKnown RBP10.75□□□□□ -0.69
ACTN1-215ENST00000555616 MCM4P33991 863 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 PTGDRQ13258 359 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 EPHA7Q15375 998 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 MTERF2Q49AM1 385 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 ZNF689Q96CS4 500 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-215ENST00000555616 MTMR9Q96QG7 549 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 PPP1R16BQ96T49 567 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 LXNQ9BS40 222 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 C17orf80Q9BSJ5 609 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 SUGCTQ9HAC7 445 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 GDPD2Q9HCC8 539 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
ACTN1-215ENST00000555616 MARCH6O60337 910 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 MGEA5O60502 916 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 PRPF40AO75400 957 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 MAFO75444 373 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 LYPLA2O95372 231 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 OR52Z1P0C646 297 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 STAG3L1P0CL83 205 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 DARSP14868 501 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 EIF4BP23588 611 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 SARSP49591 514 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 GPC3P51654 580 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 NLRP11P59045 1033 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 ATP2C1P98194 919 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 DRP2Q13474 957 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 DSC3Q14574 896 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 PTPAQ15257 358 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 EPC2Q52LR7 807 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 PLA2G4FQ68DD2 849 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 NCAPH2Q6IBW4 605 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 NEK9Q8TD19 979 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 JPH2Q9BR39 696 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 ZSWIM4Q9H7M6 989 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 CYP26B1Q9NR63 512 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 RGS18Q9NS28 235 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 C1orf112Q9NSG2 853 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 LMCD1Q9NZU5 365 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 ST3GAL5Q9UNP4 418 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 MYH9P35579 1960 aaKnown RBP10.74□□□□□ -0.69
ACTN1-215ENST00000555616 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
ACTN1-215ENST00000555616 SPTBN5Q9NRC6 3674 aaKnown RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 REV3LO60673 3130 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 C9IYK1 514 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 C5orf67F2Z3F1 127 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 MARCKSP29966 332 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 RFC5P40937 340 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 PRPHP41219 470 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 UBE2HP62256 183 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 CDC42EP1Q00587 391 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 CCDC85BQ15834 202 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 SLC24A5Q71RS6 500 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 ZNF410Q86VK4 478 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 TMEM192Q8IY95 271 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 CMTR2Q8IYT2 770 aaKnown RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 FIBCD1Q8N539 461 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 SLC7A3Q8WY07 619 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms