RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 LTFP02788 710 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 PYGMP11217 842 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 POLD1P28340 1107 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 IL2P60568 153 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
VRK1-205ENST00000555402 STAT4Q14765 748 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 NOLC1Q14978 699 aaKnown RBP eCLIP7.28□□□□□ -1.24
VRK1-205ENST00000555402 TMEM177Q53S58 311 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 ODR4Q5SWX8 454 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 OTOP3Q7RTS5 596 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 MRGPRGQ86SM5 289 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 KIF18BQ86Y91 864 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 DPYSL5Q9BPU6 564 aa7.28□□□□□ -1.24
VRK1-205ENST00000555402 CELF4Q9BZC1 486 aaKnown RBP7.28□□□□□ -1.24
VRK1-205ENST00000555402 ZNF839A8K0R7 811 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 ZNF891A8MT65 544 aaPredicted RBP7.27□□□□□ -1.25
VRK1-205ENST00000555402 CBX4O00257 560 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 TMPRSS15P98073 1019 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 DUSP8Q13202 625 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 CRY1Q16526 586 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 RNF219Q5W0B1 726 aaPredicted RBP7.27□□□□□ -1.25
VRK1-205ENST00000555402 C16orf59Q7L2K0 433 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 ZNF808Q8N4W9 903 aaPredicted RBP7.27□□□□□ -1.25
VRK1-205ENST00000555402 CISD2Q8N5K1 135 aaKnown RBP7.27□□□□□ -1.25
VRK1-205ENST00000555402 AGAP2Q99490 1192 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.25
VRK1-205ENST00000555402 NEMP1O14524 444 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 ZEB2O60315 1214 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 CUTAO60888 179 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 KATNA1O75449 491 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 F2P00734 622 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 MAKP20794 623 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 C2orf69Q8N8R5 385 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 CHST14Q8NCH0 376 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 ZNF483Q8TF39 744 aaPredicted RBP7.26□□□□□ -1.25
VRK1-205ENST00000555402 JDP2Q8WYK2 163 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 GPR101Q96P66 508 aaPredicted RBP7.26□□□□□ -1.25
VRK1-205ENST00000555402 ORAI3Q9BRQ5 295 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 PLA2G12BQ9BX93 195 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 TELO2Q9Y4R8 837 aa7.26□□□□□ -1.25
VRK1-205ENST00000555402 MATN2O00339 956 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 TRAF5O00463 557 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 WNT9AO14904 365 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 GPR39O43194 453 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 GNAT1P11488 350 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 KRT15P19012 456 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 HIBADHP31937 336 aaKnown RBP7.25□□□□□ -1.25
VRK1-205ENST00000555402 ID4P47928 161 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 RRADP55042 308 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 ITKQ08881 620 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 TOP3AQ13472 1001 aaPredicted RBP7.25□□□□□ -1.25
VRK1-205ENST00000555402 ZMAT1Q5H9K5 638 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 DPY19L2P1Q6NXN4 242 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 EP400NLQ6ZTU2 488 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 ZNF627Q7L945 461 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 UHMK1Q8TAS1 419 aaKnown RBP7.25□□□□□ -1.25
VRK1-205ENST00000555402 C12orf65Q9H3J6 166 aaKnown RBP7.25□□□□□ -1.25
VRK1-205ENST00000555402 THG1LQ9NWX6 298 aaKnown RBP7.25□□□□□ -1.25
VRK1-205ENST00000555402 NR2E1Q9Y466 385 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 DMRT1Q9Y5R6 373 aa7.25□□□□□ -1.25
VRK1-205ENST00000555402 PHLDB1Q86UU1 1377 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 FKBP9O95302 570 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 COL6A2P12110 1019 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 BPIP17213 487 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 SPIRE1Q08AE8 756 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 FOXL1Q12952 345 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 PCSK4Q6UW60 755 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 FKBP9P1Q75LS8 142 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 OVCH1Q7RTY7 1134 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.24□□□□□ -1.25
VRK1-205ENST00000555402 C11orf74Q86VG3 221 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 SPATS2Q86XZ4 545 aaKnown RBP7.24□□□□□ -1.25
VRK1-205ENST00000555402 MTMR8Q96EF0 704 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 ZNF703Q9H7S9 590 aaPredicted RBP7.24□□□□□ -1.25
VRK1-205ENST00000555402 B4GALT6Q9UBX8 382 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 CBLCQ9ULV8 474 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 APOBEC2Q9Y235 224 aaKnown RBP7.24□□□□□ -1.25
VRK1-205ENST00000555402 NUB1Q9Y5A7 615 aa7.24□□□□□ -1.25
VRK1-205ENST00000555402 KRT37O76014 449 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 PDE6AP16499 860 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 RPS19P39019 145 aaKnown RBP7.23□□□□□ -1.25
VRK1-205ENST00000555402 ADCYAP1R1P41586 468 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
VRK1-205ENST00000555402 OCRLQ01968 901 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 DSG1Q02413 1049 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 IQSEC1Q6DN90 963 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 OSTM1Q86WC4 334 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 SMC1BQ8NDV3 1235 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 SCYL1Q96KG9 808 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 TLR9Q9NR96 1032 aa7.23□□□□□ -1.25
VRK1-205ENST00000555402 PARNO95453 639 aaKnown RBP7.22□□□□□ -1.25
VRK1-205ENST00000555402 MTMR1Q13613 665 aa7.22□□□□□ -1.25
VRK1-205ENST00000555402 ARHGAP44Q17R89 818 aa7.22□□□□□ -1.25
VRK1-205ENST00000555402 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
VRK1-205ENST00000555402 COG1Q8WTW3 980 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms