RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 ANKEF1Q9NU02 776 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
SYNE2-214ENST00000554928 A0A087WZ62 844 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 E9PMD0 336 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 ENPP3O14638 875 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 TMOD1P28289 359 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 RFC5P40937 340 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 PAK2Q13177 524 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 GRB10Q13322 594 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 USP49Q70CQ1 688 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 MAEAQ7L5Y9 396 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 OTUD6AQ7L8S5 288 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 FDXACB1Q9BRP7 624 aaPredicted RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
SYNE2-214ENST00000554928 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
SYNE2-214ENST00000554928 RPS6KA5O75582 802 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 GABBR2O75899 941 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 KCNJ6P48051 423 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 CLCN6P51797 869 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 SLC7A3Q8WY07 619 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 TIFAQ96CG3 184 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 TFIP11Q9UBB9 837 aaKnown RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-214ENST00000554928 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.21
SYNE2-214ENST00000554928 ARID2Q68CP9 1835 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 UPP2O95045 317 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 F13A1P00488 732 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 DARSP14868 501 aaKnown RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 ARL2P36404 184 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 LAMTOR4Q0VGL1 99 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 KRT79Q5XKE5 535 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 HAUS3Q68CZ6 603 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 DEFB123Q8N688 67 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 PHOSPHO2Q8TCD6 241 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 APBB2Q92870 758 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 SCLT1Q96NL6 688 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 NACC1Q96RE7 527 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 MTRQ99707 1265 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 ZSCAN16Q9H4T2 348 aaPredicted RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
SYNE2-214ENST00000554928 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 SQORQ9Y6N5 450 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
SYNE2-214ENST00000554928 CDH23Q9H251 3354 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 GJB5O95377 273 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 CA3P07451 260 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 XRCC6P12956 609 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYNE2-214ENST00000554928 GLRA2P23416 452 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 GATMP50440 423 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 DNM2P50570 870 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 CAPSQ13938 189 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 DSC3Q14574 896 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 HYIQ5T013 277 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 CABP7Q86V35 215 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
SYNE2-214ENST00000554928 TOP1MTQ969P6 601 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 EPSTI1Q96J88 318 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 RUSC1Q9BVN2 902 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
SYNE2-214ENST00000554928 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 PCDHA11Q9Y5I1 949 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 GBF1Q92538 1859 aa13.75□□□□□ -0.21
SYNE2-214ENST00000554928 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms