RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CTAGE8P0CG41 777 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CSB-PGBD3P0DP91 1061 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 DRD4P21917 467 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 HOXC8P31273 242 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 NAP1L1P55209 391 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 EIF3BP55884 814 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 RPL26P61254 145 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 GOLGA8FQ08AF8 430 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF844Q08AG5 666 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 GOLGA8DPQ0D2H9 430 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TRAF1Q13077 416 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SPP2Q13103 211 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PTGISQ16647 500 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MAP9Q49MG5 647 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TMEM63BQ5T3F8 832 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 IQCEQ6IPM2 695 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 RINT1Q6NUQ1 792 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SV2BQ7L1I2 683 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TAS1R3Q7RTX0 852 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L1Q7RTZ2 530 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SLC51AQ86UW1 340 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MAP4K3Q8IVH8 894 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CTAGE4Q8IX94 777 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MAB21L3Q8N8X9 362 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 UBXN4Q92575 508 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TAF4BQ92750 862 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SECISBP2LQ93073 1101 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TMEM237Q96Q45 408 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF341Q9BYN7 854 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 NEUROG2Q9H2A3 272 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 VCPKMTQ9H867 229 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 POLR2AP24928 1970 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PP2D1A8MPX8 630 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PPEF1O14829 653 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PRPF4O43172 522 aaKnown RBP eCLIP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 LGR5O75473 907 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ERLIN1O75477 346 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GLI1P08151 1106 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 LMNB1P20700 586 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CASP1P29466 404 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 NUMBP49757 651 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CASP5P51878 434 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 HSPA2P54652 639 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GCNT1Q02742 428 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ACTN3Q08043 901 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM187BQ17R55 369 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 STXBP5Q5T5C0 1151 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SLC39A4Q6P5W5 647 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM228AQ86W67 206 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MYOCDQ8IZQ8 938 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAF2Q96CS3 445 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PIGSQ96S52 555 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 DDX25Q9UHL0 483 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PCDHGC3Q9UN70 934 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 POLIQ9UNA4 740 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 COG5Q9UP83 839 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MCM3APO60318 1980 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TDRD15B5MCY1 1934 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TMCO5BA8MYB1 307 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MYO1FO00160 1098 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 N4BP1O75113 896 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TDP2O95551 362 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM107AO95990 144 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PLEKP08567 350 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 UCHL3P15374 230 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FERP16591 822 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 RXRAP19793 462 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GPTP24298 496 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MRPL19P49406 292 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CENPCQ03188 943 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 BTKQ06187 659 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CALCRLQ16602 461 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM43BQ6ZT52 329 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CYP4V2Q6ZWL3 525 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CROCCP2Q86T23 111 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PHF13Q86YI8 300 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ENDOVQ8N8Q3 282 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 GLIS3Q8NEA6 775 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 IFT43Q96FT9 208 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ATP6V1G3Q96LB4 118 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SETDB2Q96T68 719 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FAM107BQ9H098 131 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 KANSL2Q9H9L4 492 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PTPRHQ9HD43 1115 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 TAB2Q9NYJ8 693 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 FARP1Q9Y4F1 1045 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 A0A087WUV0 522 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 YDJCA8MPS7 323 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 MIF4GDA9UHW6 222 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 AKAP3O75969 853 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ITGBL1O95965 494 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PTMAP06454 111 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 ATP5BP06576 529 aaKnown RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
SEC23A-207ENST00000554615 CHRM1P11229 460 aaPredicted RBP3.77□□□□□ -1.81
SEC23A-207ENST00000554615 SOX5P35711 763 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms