RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SPG21Q9NZD8 308 aa27.4■■□□□ 1.98
FOXA1-204ENST00000554607 ADD1P35611 737 aaKnown RBP27.39■■□□□ 1.98
FOXA1-204ENST00000554607 FGD1P98174 961 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 PRR16Q569H4 304 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 SYCE2Q6PIF2 218 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 ECHDC2Q86YB7 292 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 CASP10Q92851 521 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 ASIC4Q96FT7 647 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 IRF2BPLQ9H1B7 796 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 ADAMTS10Q9H324 1103 aa27.39■■□□□ 1.98
FOXA1-204ENST00000554607 HIDE1A8MVS5 230 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 WDR64B1ANS9 1081 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 CIITAP33076 1130 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 METAP2P50579 478 aaKnown RBP eCLIP27.38■■□□□ 1.97
FOXA1-204ENST00000554607 ADCK5Q3MIX3 580 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 BMP2KLQ5H9B9 411 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 LLGL2Q6P1M3 1020 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 ZBTB33Q86T24 672 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 RASEFQ8IZ41 740 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 LINC01465Q8N7H1 131 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 PHOX2BQ99453 314 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 RNF19AQ9NV58 838 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 NR2E1Q9Y466 385 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 ZDBF2Q9HCK1 2354 aa27.38■■□□□ 1.97
FOXA1-204ENST00000554607 EOMESO95936 686 aa27.37■■□□□ 1.97
FOXA1-204ENST00000554607 TCF15Q12870 199 aa27.37■■□□□ 1.97
FOXA1-204ENST00000554607 BMS1Q14692 1282 aaKnown RBP27.37■■□□□ 1.97
FOXA1-204ENST00000554607 TPRNQ4KMQ1 711 aa27.37■■□□□ 1.97
FOXA1-204ENST00000554607 BICD2Q8TD16 824 aa27.37■■□□□ 1.97
FOXA1-204ENST00000554607 SMC1AQ14683 1233 aaKnown RBP27.36■■□□□ 1.97
FOXA1-204ENST00000554607 CES5AQ6NT32 575 aa27.36■■□□□ 1.97
FOXA1-204ENST00000554607 LRRC71Q8N4P6 559 aa27.36■■□□□ 1.97
FOXA1-204ENST00000554607 NECTIN4Q96NY8 510 aa27.36■■□□□ 1.97
FOXA1-204ENST00000554607 APOL5Q9BWW9 433 aa27.36■■□□□ 1.97
FOXA1-204ENST00000554607 A0A0U1RQF3 1178 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 PRPF3O43395 683 aaKnown RBP27.35■■□□□ 1.97
FOXA1-204ENST00000554607 OATP04181 439 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 AVPR2P30518 371 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 MRPL43Q8N983 215 aaKnown RBP27.35■■□□□ 1.97
FOXA1-204ENST00000554607 RNF169Q8NCN4 708 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 SCLT1Q96NL6 688 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 DISC1Q9NRI5 854 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 DACT1Q9NYF0 836 aa27.35■■□□□ 1.97
FOXA1-204ENST00000554607 DARSP14868 501 aaKnown RBP27.34■■□□□ 1.97
FOXA1-204ENST00000554607 GPC3P51654 580 aa27.34■■□□□ 1.97
FOXA1-204ENST00000554607 NUBP1P53384 320 aa27.34■■□□□ 1.97
FOXA1-204ENST00000554607 CDC42EP1Q00587 391 aa27.34■■□□□ 1.97
FOXA1-204ENST00000554607 AKAP17AQ02040 695 aaKnown RBP27.34■■□□□ 1.97
FOXA1-204ENST00000554607 ITIH3Q06033 890 aa27.34■■□□□ 1.97
FOXA1-204ENST00000554607 SLC39A11Q8N1S5 342 aa27.34■■□□□ 1.97
FOXA1-204ENST00000554607 MRPL9Q9BYD2 267 aaKnown RBP27.34■■□□□ 1.97
FOXA1-204ENST00000554607 ST18O60284 1047 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 PBX3P40426 434 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 CLLU1OSQ5K130 101 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 RIT2Q99578 217 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 ADAM7Q9H2U9 754 aa27.33■■□□□ 1.97
FOXA1-204ENST00000554607 KMT2EQ8IZD2 1858 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 CARNS1A5YM72 827 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 C2orf71A6NGG8 1288 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 ADAMTS3O15072 1205 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 ZNF862O60290 1169 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 SFNP31947 248 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 ALDH7A1P49419 539 aaKnown RBP27.32■■□□□ 1.96
FOXA1-204ENST00000554607 VCPP55072 806 aaKnown RBP27.32■■□□□ 1.96
FOXA1-204ENST00000554607 PRKCEQ02156 737 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 TBC1D8BQ0IIM8 1120 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 ZNF598Q86UK7 904 aaKnown RBP27.32■■□□□ 1.96
FOXA1-204ENST00000554607 UBALD2Q8IYN6 164 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 CCDC148Q8NFR7 591 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 NLRP7Q8WX94 980 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 LENG9Q96B70 501 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 RIPOR3Q96MK2 946 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 TSHZ2Q9NRE2 1034 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 HCFC2Q9Y5Z7 792 aa27.32■■□□□ 1.96
FOXA1-204ENST00000554607 USP11P51784 963 aa27.31■■□□□ 1.96
FOXA1-204ENST00000554607 JAK3P52333 1124 aa27.31■■□□□ 1.96
FOXA1-204ENST00000554607 Q6ZUG5 572 aa27.31■■□□□ 1.96
FOXA1-204ENST00000554607 HELQQ8TDG4 1101 aa27.31■■□□□ 1.96
FOXA1-204ENST00000554607 CHST12Q9NRB3 414 aa27.31■■□□□ 1.96
FOXA1-204ENST00000554607 MSH4O15457 936 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 GAS7O60861 476 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 SP100P23497 879 aaPredicted RBP27.3■■□□□ 1.96
FOXA1-204ENST00000554607 MTHFRP42898 656 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 TMEM87AQ8NBN3 555 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 KREMEN2Q8NCW0 462 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 TMEM169Q96HH4 297 aa27.3■■□□□ 1.96
FOXA1-204ENST00000554607 ZNF668Q96K58 619 aaPredicted RBP27.3■■□□□ 1.96
FOXA1-204ENST00000554607 GCOM2Q9BZD3 368 aaPredicted RBP27.3■■□□□ 1.96
FOXA1-204ENST00000554607 CLASP2O75122 1294 aaKnown RBP27.29■■□□□ 1.96
FOXA1-204ENST00000554607 CXCL14O95715 111 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 BCAR1P56945 870 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 MTMR3Q13615 1198 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 BRF1Q92994 677 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 CCDC136Q96JN2 1154 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 TEKT3Q9BXF9 490 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 SORCS3Q9UPU3 1222 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 NID2Q14112 1375 aa27.29■■□□□ 1.96
FOXA1-204ENST00000554607 WDR81Q562E7 1941 aa27.28■■□□□ 1.96
FOXA1-204ENST00000554607 SKIP12755 728 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms