RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GRB10Q13322 594 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 DRP2Q13474 957 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 NBR1Q14596 966 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 NPAS4Q8IUM7 802 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 C4orf19Q8IY42 314 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 LINC01465Q8N7H1 131 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 NLRP4Q96MN2 994 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 MTMR9Q96QG7 549 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 C17orf80Q9BSJ5 609 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 GCOM2Q9BZD3 368 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
SHMT2-213ENST00000554600 WRAP73Q9P2S5 460 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-213ENST00000554600 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ZBTB39O15060 712 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 CSDE1O75534 798 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 SLITRK3O94933 977 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ZSCAN20P17040 1043 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 FGFR4P22455 802 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 EIF4BP23588 611 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 CTNNB1P35222 781 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 RFC5P40937 340 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 TECP42680 631 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 CDC42EP1Q00587 391 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ORC2Q13416 577 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 PAN2Q504Q3 1202 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 LARP1BQ659C4 914 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 NEK9Q8TD19 979 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 ADAMTS10Q9H324 1103 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 PCDHB7Q9Y5E2 793 aa11.91□□□□□ -0.5
SHMT2-213ENST00000554600 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
SHMT2-213ENST00000554600 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 A0A087WWV3 80 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 A0A087WZ62 844 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 IGKV6-21A0A0C4DH24 114 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 MGEA5O60502 916 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 SARSP49591 514 aaKnown RBP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 EMC2Q15006 297 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 EPC2Q52LR7 807 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 KSR1Q8IVT5 923 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 TMEM192Q8IY95 271 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 RNF169Q8NCN4 708 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 PSPC1Q8WXF1 523 aaKnown RBP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 TMEM143Q96AN5 459 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 SAMD11Q96NU1 681 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 FDXACB1Q9BRP7 624 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 C1orf112Q9NSG2 853 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-213ENST00000554600 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 COL4A3BPQ9Y5P4 624 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 COL4A6Q14031 1691 aa11.9□□□□□ -0.5
SHMT2-213ENST00000554600 EYSQ5T1H1 3165 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 DGKIO75912 1065 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 SRGAP2CP0DJJ0 459 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 SFPQP23246 707 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHMT2-213ENST00000554600 GATMP50440 423 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 GPM6BQ13491 265 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 SPOUT1Q5T280 376 aaKnown RBP11.89□□□□□ -0.51
SHMT2-213ENST00000554600 SLC24A5Q71RS6 500 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 CATSPER4Q7RTX7 472 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 ZNF410Q86VK4 478 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
SHMT2-213ENST00000554600 MTRQ99707 1265 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 INO80BQ9C086 356 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-213ENST00000554600 DHX33Q9H6R0 707 aaKnown RBP11.89□□□□□ -0.51
SHMT2-213ENST00000554600 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 RGS18Q9NS28 235 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 MTCH2Q9Y6C9 303 aa11.89□□□□□ -0.51
SHMT2-213ENST00000554600 VPS37CA5D8V6 355 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-213ENST00000554600 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 C9IYK1 514 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 GAS2O43903 313 aaKnown RBP11.88□□□□□ -0.51
SHMT2-213ENST00000554600 LPXNO60711 386 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
SHMT2-213ENST00000554600 MED24O75448 989 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 CSPG5O95196 566 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 LYPLA2O95372 231 aa11.88□□□□□ -0.51
SHMT2-213ENST00000554600 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms