RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-227ENST00000554491 YIPF4Q9BSR8 244 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ACBD3Q9H3P7 528 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 CRB1P82279 1406 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 YTHDC2Q9H6S0 1430 aaKnown RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 QRICH2Q9H0J4 1663 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 B2RBV5 119 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 HMGB1P1B2RPK0 211 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 LAMTOR5O43504 91 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 KIF1CO43896 1103 aaKnown RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 SNRPB2P08579 225 aaKnown RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 CCDC172P0C7W6 258 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 NAT2P11245 290 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 NEFHP12036 1026 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 LCP1P13796 627 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 POLD1P28340 1107 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 MLLT6P55198 1093 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 E4F1Q66K89 784 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 DENND5AQ6IQ26 1287 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 CTR9Q6PD62 1173 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 RCBTB1Q8NDN9 531 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 SH3RF3Q8TEJ3 882 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 SCAND2PQ9GZW5 306 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 THRAP3Q9Y2W1 955 aaKnown RBP5.31□□□□□ -1.56
ATXN3-227ENST00000554491 ABCC6O95255 1503 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 PIK3C2GO75747 1445 aa5.31□□□□□ -1.56
ATXN3-227ENST00000554491 ROCK1Q13464 1354 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 TCRBV5S2A0A599 114 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 HGSO14964 777 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 MEFVO15553 781 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 TOMM70O94826 608 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 ZRANB2O95218 330 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 CYP1A1P04798 512 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 HSPA1AP0DMV8 641 aaKnown RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 HSPA1BP0DMV9 641 aaKnown RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 IL13P35225 146 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 GORABQ5T7V8 394 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 C6orf15Q6UXA7 325 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 ANKRD13AQ8IZ07 590 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 CCDC94Q9BW85 323 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 NGRNQ9NPE2 291 aaKnown RBP5.3□□□□□ -1.56
ATXN3-227ENST00000554491 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 PCDHA2Q9Y5H9 948 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 LY75O60449 1722 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 PCNTO95613 3336 aa5.3□□□□□ -1.56
ATXN3-227ENST00000554491 CPDO75976 1380 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 RGPD5Q99666 1765 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 RPGRIP1LQ68CZ1 1315 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 CCER2I3L3R5 266 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 SMAD7O15105 426 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 GPR42O15529 346 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 MYO1BO43795 1136 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 SCG5P05408 212 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 C6P13671 934 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 SCP2P22307 547 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 HOXC12P31275 282 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 ZRSR2Q15696 482 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 SV2CQ496J9 727 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 STEAP3Q658P3 488 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 DDX46Q7L014 1031 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 Q8N1X5 172 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 MNS1Q8NEH6 495 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 PMFBP1Q8TBY8 1022 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 IGDCC4Q8TDY8 1250 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 TOE1Q96GM8 510 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 PTPN18Q99952 460 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 NCAPGQ9BPX3 1015 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 SMC4Q9NTJ3 1288 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 DTLQ9NZJ0 730 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 STK26Q9P289 416 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 RBPJLQ9UBG7 517 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 ANAPC4Q9UJX5 808 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 CROTQ9UKG9 612 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 COA3Q9Y2R0 106 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 COL18A1P39060 1754 aa5.29□□□□□ -1.56
ATXN3-227ENST00000554491 BRD4O60885 1362 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 EIF3AQ14152 1382 aaKnown RBP5.29□□□□□ -1.56
ATXN3-227ENST00000554491 USP54Q70EL1 1684 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 CCDC66A2RUB6 948 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 GOLGA6CA6NDK9 693 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 GOLGA6BA6NDN3 693 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 UNCXA6NJT0 531 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 TPD52L2O43399 206 aaKnown RBP5.28□□□□□ -1.56
ATXN3-227ENST00000554491 TADA3O75528 432 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 LRG1P02750 347 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 ZNF853P0CG23 659 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 GOLGA6DP0CG33 693 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 KCNJ6P48051 423 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms