RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GPC3P51654 580 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CDC42EP1Q00587 391 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 GUCY1B3Q02153 619 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CALCRLQ16602 461 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 KIZQ2M2Z5 673 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 ANO5Q75V66 913 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 SPRED2Q7Z698 418 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 RTN4RL1Q86UN2 441 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 NOSTRINQ8IVI9 506 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 C4orf19Q8IY42 314 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 LRRC71Q8N4P6 559 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 METTL13Q8N6R0 699 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 FAM184AQ8NB25 1140 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 SLC17A8Q8NDX2 589 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 NEK9Q8TD19 979 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 ARNTL2Q8WYA1 636 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 ZNF689Q96CS4 500 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 MTMR9Q96QG7 549 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 YME1L1Q96TA2 773 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 OSMRQ99650 979 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 LXNQ9BS40 222 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 ADAMTS10Q9H324 1103 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 TMX1Q9H3N1 280 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CYP26B1Q9NR63 512 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 C1orf112Q9NSG2 853 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 LMCD1Q9NZU5 365 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 WRAP73Q9P2S5 460 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 PCDHA12Q9UN75 941 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 ADGRA3Q8IWK6 1321 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 FNDC1Q4ZHG4 1894 aaPredicted RBP8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CDH23Q9H251 3354 aa8.44□□□□□ -1.06
LINC00640-201ENST00000554409 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 ATG2AQ2TAZ0 1938 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM150BA6NC51 233 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 DDX11L8A8MPP1 907 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 LPXNO60711 386 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 DGKIO75912 1065 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 UPP2O95045 317 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 LYPLA2O95372 231 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 STAG3L1P0CL83 205 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 IGFBP4P22692 258 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 RFC5P40937 340 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 TRAPPC10P48553 1259 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 DNM2P50570 870 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 NLRP11P59045 1033 aaKnown RBP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 GRB10Q13322 594 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 CAMK2BQ13554 666 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 E2F4Q16254 413 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 MTERF2Q49AM1 385 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 NCAPH2Q6IBW4 605 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 EXOC8Q8IYI6 725 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 DYDC2Q96IM9 177 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 TMX3Q96JJ7 454 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 HSD17B14Q9BPX1 270 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 JPH2Q9BR39 696 aaPredicted RBP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 ZSWIM4Q9H7M6 989 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 TTC12Q9H892 705 aaPredicted RBP8.43□□□□□ -1.06
LINC00640-201ENST00000554409 CERS4Q9HA82 394 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 SUGCTQ9HAC7 445 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 RGS18Q9NS28 235 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 ST3GAL5Q9UNP4 418 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 GINS2Q9Y248 185 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 MTCH2Q9Y6C9 303 aa8.43□□□□□ -1.06
LINC00640-201ENST00000554409 C9IYK1 514 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 C5orf67F2Z3F1 127 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 RFXAPO00287 272 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 GAS2O43903 313 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 MGEA5O60502 916 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 SLITRK3O94933 977 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 LINC00271P0C7V0 271 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 DARSP14868 501 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 EIF4BP23588 611 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 YWHABP31946 246 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 MCM7P33993 719 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 TXKP42681 527 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 DRP2Q13474 957 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 CTTNQ14247 550 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 DSC3Q14574 896 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 TTC38Q5R3I4 469 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 SLC24A5Q71RS6 500 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 OTUD6AQ7L8S5 288 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 ZNF410Q86VK4 478 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 CMTR2Q8IYT2 770 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 FIBCD1Q8N539 461 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 SLC7A3Q8WY07 619 aa8.42□□□□□ -1.06
LINC00640-201ENST00000554409 CLP1Q92989 425 aaKnown RBP8.42□□□□□ -1.06
LINC00640-201ENST00000554409 PPP1R16BQ96T49 567 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms