RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 FAM86C2PA6NEL3 165 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 C19orf67A6NJJ6 358 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 FGF18O76093 207 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 NEFLP07196 543 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 LAG3P18627 525 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 DNM2P50570 870 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 GPC3P51654 580 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 PDE12Q6L8Q7 609 aaKnown RBP21.12■□□□□ 0.97
CPSF2-203ENST00000554290 ADGRD2Q7Z7M1 963 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 ABI1Q8IZP0 508 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 COLGALT1Q8NBJ5 622 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 NLRP7Q8WX94 980 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 NIFKQ9BYG3 293 aaKnown RBP21.12■□□□□ 0.97
CPSF2-203ENST00000554290 TLE6Q9H808 572 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 C11orf16Q9NQ32 467 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 TLR9Q9NR96 1032 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 ARIH1Q9Y4X5 557 aaPredicted RBP21.12■□□□□ 0.97
CPSF2-203ENST00000554290 EVPLQ92817 2033 aa21.12■□□□□ 0.97
CPSF2-203ENST00000554290 MYO7AQ13402 2215 aa21.11■□□□□ 0.97
CPSF2-203ENST00000554290 DARSP14868 501 aaKnown RBP21.11■□□□□ 0.97
CPSF2-203ENST00000554290 XBP1P17861 261 aa21.11■□□□□ 0.97
CPSF2-203ENST00000554290 TARBP2Q15633 366 aaKnown RBP21.11■□□□□ 0.97
CPSF2-203ENST00000554290 RBM23Q86U06 439 aaKnown RBP21.11■□□□□ 0.97
CPSF2-203ENST00000554290 FAM122AQ96E09 287 aa21.11■□□□□ 0.97
CPSF2-203ENST00000554290 ZNF668Q96K58 619 aaPredicted RBP21.11■□□□□ 0.97
CPSF2-203ENST00000554290 MBOAT7Q96N66 472 aa21.11■□□□□ 0.97
CPSF2-203ENST00000554290 AIFM3Q96NN9 605 aa21.11■□□□□ 0.97
CPSF2-203ENST00000554290 SEPT9Q9UHD8 586 aaPredicted RBP21.11■□□□□ 0.97
CPSF2-203ENST00000554290 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 DCXO43602 365 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 PLA2G5P39877 138 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 NPY5RQ15761 445 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 INF2Q27J81 1249 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 MTERF2Q49AM1 385 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 B3GNT9Q6UX72 402 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 ECHDC2Q86YB7 292 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 ETNPPLQ8TBG4 499 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 MSLNLQ96KJ4 702 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 GCOM2Q9BZD3 368 aaPredicted RBP21.1■□□□□ 0.97
CPSF2-203ENST00000554290 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
CPSF2-203ENST00000554290 CWH43Q9H720 699 aa21.1■□□□□ 0.97
CPSF2-203ENST00000554290 DDX25Q9UHL0 483 aaKnown RBP21.1■□□□□ 0.97
CPSF2-203ENST00000554290 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
CPSF2-203ENST00000554290 CCDC194A0A1B0GVG4 234 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 DDX11L8A8MPP1 907 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 PRR33A8MZF0 331 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 EYA4O95677 639 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 CASD1Q96PB1 797 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 CDCA3Q99618 268 aaPredicted RBP21.09■□□□□ 0.97
CPSF2-203ENST00000554290 PHF20Q9BVI0 1012 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 DACT1Q9NYF0 836 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 HCSTQ9UBK5 93 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 KCNJ14Q9UNX9 436 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
CPSF2-203ENST00000554290 KIAA1671Q9BY89 1806 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 ATG2AQ2TAZ0 1938 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 A0A0U1RQF3 1178 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 EOMESO95936 686 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 PPM1AP35813 382 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 PSMC5P62195 406 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 LETM2Q2VYF4 491 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 LRRC43Q8N309 656 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 RNF169Q8NCN4 708 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 FAM20AQ96MK3 541 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 CHST12Q9NRB3 414 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 CLEC1BQ9P126 229 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 PCDHGC5Q9Y5F6 944 aa21.08■□□□□ 0.97
CPSF2-203ENST00000554290 IGKV6-21A0A0C4DH24 114 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 DKC1O60832 514 aaKnown RBP eCLIP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 STBD1O95210 358 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 GCFC2P16383 781 aaKnown RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 ERVFC1P60507 584 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 KRT17Q04695 432 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 SCRN1Q12765 414 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 COASYQ13057 564 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 NEK8Q86SG6 692 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 SMRP1Q8NCR6 262 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 MRPS27Q92552 414 aaKnown RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 NAP1L4Q99733 375 aaKnown RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 JPH2Q9BR39 696 aaPredicted RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 INO80BQ9C086 356 aaPredicted RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 RNF19AQ9NV58 838 aa21.07■□□□□ 0.96
CPSF2-203ENST00000554290 FNDC1Q4ZHG4 1894 aaPredicted RBP21.07■□□□□ 0.96
CPSF2-203ENST00000554290 STK36Q9NRP7 1315 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 MAFO75444 373 aaPredicted RBP21.06■□□□□ 0.96
CPSF2-203ENST00000554290 FGFR4P22455 802 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 SFPQP23246 707 aaKnown RBP eCLIP21.06■□□□□ 0.96
CPSF2-203ENST00000554290 DRP2Q13474 957 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 ANKRD1Q15327 319 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 PPP4R3AQ6IN85 833 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 LRRC55Q6ZSA7 311 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 CEP89Q96ST8 783 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 SPG21Q9NZD8 308 aa21.06■□□□□ 0.96
CPSF2-203ENST00000554290 SUCLA2Q9P2R7 463 aaPredicted RBP21.06■□□□□ 0.96
CPSF2-203ENST00000554290 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
CPSF2-203ENST00000554290 A0A087WZ62 844 aa21.05■□□□□ 0.96
CPSF2-203ENST00000554290 TMEM150BA6NC51 233 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms