RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CTDP1Q9Y5B0 961 aaPredicted RBP4.74□□□□□ -1.65
VRK1-202ENST00000553683 ULK1O75385 1050 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 PRPF6O94906 941 aaKnown RBP4.73□□□□□ -1.65
VRK1-202ENST00000553683 CPEP16870 476 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 CR2P20023 1033 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 ADCYAP1R1P41586 468 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 MASP1P48740 699 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 GPR15P49685 360 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 RGS3P49796 1198 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 HGFACQ04756 655 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 FAPQ12884 760 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 TERF2Q15554 542 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 GAGE13Q4V321 117 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 PRAMEF9Q5VWM5 478 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 EGFLAMQ63HQ2 1017 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 FRMD7Q6ZUT3 714 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 LARP4Q71RC2 724 aaKnown RBP eCLIP4.73□□□□□ -1.654e-6■■□□□ 12.8
VRK1-202ENST00000553683 PRRT2Q7Z6L0 340 aaPredicted RBP4.73□□□□□ -1.65
VRK1-202ENST00000553683 CHAC2Q8WUX2 184 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 NKD2Q969F2 451 aaPredicted RBP4.73□□□□□ -1.65
VRK1-202ENST00000553683 CDK5RAP1Q96SZ6 601 aaKnown RBP4.73□□□□□ -1.65
VRK1-202ENST00000553683 IFT22Q9H7X7 185 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 PUF60Q9UHX1 559 aaKnown RBP4.73□□□□□ -1.65
VRK1-202ENST00000553683 KCNG1Q9UIX4 513 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 OAZ3Q9UMX2 235 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
VRK1-202ENST00000553683 IL2P60568 153 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 NOLC1Q14978 699 aaKnown RBP eCLIP4.72□□□□□ -1.65
VRK1-202ENST00000553683 RNF151Q2KHN1 245 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 FILIP1Q7Z7B0 1213 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 RASSF3Q86WH2 238 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 CHST13Q8NET6 341 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 PPP1R14CQ8TAE6 165 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 LEO1Q8WVC0 666 aaPredicted RBP4.72□□□□□ -1.65
VRK1-202ENST00000553683 CFHR4Q92496 578 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 RABGGTAQ92696 567 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 DVL3Q92997 716 aaPredicted RBP4.72□□□□□ -1.65
VRK1-202ENST00000553683 USP7Q93009 1102 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 SLC7A6OSQ96CW6 309 aaPredicted RBP4.72□□□□□ -1.65
VRK1-202ENST00000553683 TTC1Q99614 292 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 SLC6A15Q9H2J7 730 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 CD248Q9HCU0 757 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 EMC7Q9NPA0 242 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 SPTLC3Q9NUV7 552 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 H2AFY2Q9P0M6 372 aaPredicted RBP4.72□□□□□ -1.65
VRK1-202ENST00000553683 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 APOBEC2Q9Y235 224 aaKnown RBP4.72□□□□□ -1.65
VRK1-202ENST00000553683 TESMINQ9Y4I5 508 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 NUMBLQ9Y6R0 609 aa4.72□□□□□ -1.65
VRK1-202ENST00000553683 CADPSQ9ULU8 1353 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.71□□□□□ -1.66
VRK1-202ENST00000553683 MTSS1O43312 755 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 SLC26A4O43511 780 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 OPHN1O60890 802 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 ZNF623O75123 536 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 RAD17O75943 681 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 SESN3P58005 492 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 ADAM17P78536 824 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 DUSP8Q13202 625 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 HS1BP3Q53T59 392 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 DBX2Q6ZNG2 339 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 LIMS2Q7Z4I7 341 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 RTF1Q92541 710 aaKnown RBP4.71□□□□□ -1.66
VRK1-202ENST00000553683 SLC5A5Q92911 643 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 DYDC2Q96IM9 177 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 LOXL4Q96JB6 756 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 HIST1H2AHQ96KK5 128 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 WDR92Q96MX6 357 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 GPR101Q96P66 508 aaPredicted RBP4.71□□□□□ -1.66
VRK1-202ENST00000553683 HIST1H2AJQ99878 128 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 MTG2Q9H4K7 406 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 POLR3BQ9NW08 1133 aaPredicted RBP4.71□□□□□ -1.66
VRK1-202ENST00000553683 PTPN22Q9Y2R2 807 aa4.71□□□□□ -1.66
VRK1-202ENST00000553683 ST20-MTHFSA0A0A6YYL1 179 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 MATN2O00339 956 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 DAPK3O43293 454 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 NRP2O60462 931 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 FSBPO95073 299 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 BUD31P41223 144 aaPredicted RBP4.7□□□□□ -1.66
VRK1-202ENST00000553683 SELENOPP49908 381 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 STAT5BP51692 787 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 ADCY7P51828 1080 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 RRADP55042 308 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 NFKB2Q00653 900 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 DDB1Q16531 1140 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 TBR1Q16650 682 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 ATP13A4Q4VNC1 1196 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 TCTN3Q6NUS6 607 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 POLNQ7Z5Q5 900 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 ADGRE4PQ86SQ3 457 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 CLEC14AQ86T13 490 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 TAX1BP1Q86VP1 789 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 AFAP1L2Q8N4X5 818 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 CDYL2Q8N8U2 506 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 GIMAP8Q8ND71 665 aaPredicted RBP4.7□□□□□ -1.66
VRK1-202ENST00000553683 Q8TCH9 128 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 EDAQ92838 391 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 ZNF496Q96IT1 587 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms