RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 TBC1D17Q9HA65 648 aa10.99□□□□□ -0.65
CHD8-205ENST00000553651 IGSF9Q9P2J2 1179 aa10.99□□□□□ -0.65
CHD8-205ENST00000553651 COL1A2P08123 1366 aa10.99□□□□□ -0.65
CHD8-205ENST00000553651 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 VTNP04004 478 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 CFHP08603 1231 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 SMARCA1P28370 1054 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 SLC26A2P50443 739 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 ATXN1P54253 815 aaKnown RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 ANTXR2P58335 489 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 WTAPQ15007 396 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 ZNF484Q5JVG2 852 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 PHLDB3Q6NSJ2 640 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 DDX53Q86TM3 631 aaKnown RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 CCDC60Q8IWA6 550 aaPredicted RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 SLC44A3Q8N4M1 653 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 HELQQ8TDG4 1101 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 IGDCC4Q8TDY8 1250 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
CHD8-205ENST00000553651 PSTPIP2Q9H939 334 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 SFXN1Q9H9B4 322 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 PCDHA6Q9UN73 950 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 PCDHA8Q9Y5H6 950 aa10.98□□□□□ -0.65
CHD8-205ENST00000553651 A0A0U1RQF3 1178 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 B4GALT3O60512 393 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 LILRB3O75022 631 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 PLEKHA8P1O95397 391 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 DCNP07585 359 aaKnown RBP10.97□□□□□ -0.65
CHD8-205ENST00000553651 CLCN4P51793 760 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 PTPN14Q15678 1187 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 LETM2Q2VYF4 491 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 C15orf39Q6ZRI6 1047 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 CABP7Q86V35 215 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
CHD8-205ENST00000553651 IGSF21Q96ID5 467 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 MAP3K14Q99558 947 aa10.97□□□□□ -0.65
CHD8-205ENST00000553651 AGO4Q9HCK5 861 aaKnown RBP10.97□□□□□ -0.65
CHD8-205ENST00000553651 COL4A3Q01955 1670 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 MEIS1O00470 390 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 DHX15O43143 795 aaKnown RBP10.96□□□□□ -0.65
CHD8-205ENST00000553651 PAPLNO95428 1278 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 CYP21A2P08686 494 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 SRFP11831 508 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 TGM1P22735 817 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 ALDH7A1P49419 539 aaKnown RBP10.96□□□□□ -0.65
CHD8-205ENST00000553651 GIT2Q14161 759 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 SPECC1Q5M775 1068 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 ZC3H14Q6PJT7 736 aaKnown RBP10.96□□□□□ -0.65
CHD8-205ENST00000553651 PLEKHM2Q8IWE5 1019 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 ABI1Q8IZP0 508 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 CMASQ8NFW8 434 aaPredicted RBP10.96□□□□□ -0.65
CHD8-205ENST00000553651 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 TMEM169Q96HH4 297 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 MYADMQ96S97 322 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 HINFPQ9BQA5 517 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 SDF4Q9BRK5 362 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 MYL10Q9BUA6 226 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 EPS15L1Q9UBC2 864 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 CA14Q9ULX7 337 aa10.96□□□□□ -0.65
CHD8-205ENST00000553651 PATJQ8NI35 1801 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 LRRN2O75325 713 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 GALTP07902 379 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 CNPP09543 421 aaKnown RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 EIF4BP23588 611 aaKnown RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 CA8P35219 290 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 CLCN3P51790 818 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 HDAC1Q13547 482 aaPredicted RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 ST3GAL2Q16842 350 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 PPFIBP1Q86W92 1011 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 RNF169Q8NCN4 708 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 MRPL9Q9BYD2 267 aaKnown RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 RHOBTB2Q9BYZ6 727 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 WDR6Q9NNW5 1121 aaKnown RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 SIT1Q9Y3P8 196 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
CHD8-205ENST00000553651 FAM208BQ5VWN6 2430 aa10.95□□□□□ -0.66
CHD8-205ENST00000553651 FRYQ5TBA9 3013 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 SPDYE3A6NKU9 549 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 MEIS3P2A8K0S8 358 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 STK25O00506 426 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHD8-205ENST00000553651 DDAH1O94760 285 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 ZSCAN20P17040 1043 aaPredicted RBP10.94□□□□□ -0.66
CHD8-205ENST00000553651 FGFR4P22455 802 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 SLC11A1P49279 550 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 COL9A3Q14050 684 aaPredicted RBP10.94□□□□□ -0.66
CHD8-205ENST00000553651 CEP55Q53EZ4 464 aa10.94□□□□□ -0.66
CHD8-205ENST00000553651 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
CHD8-205ENST00000553651 FAM160B1Q5W0V3 765 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms