RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C7orf69Q9H7B7 122 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PAG1Q9NWQ8 432 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CTNNA3Q9UI47 895 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TRIM33Q9UPN9 1127 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SPTBN2O15020 2390 aa6.62□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SPEGQ15772 3267 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MINDY4BA8MYZ0 360 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 F5H6K3 240 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ZBED4O75132 1171 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MICAL2O94851 1124 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GJB5O95377 273 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 NDUFB10O96000 172 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ARP10275 920 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ICAM3P32942 547 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ADD2P35612 726 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ARSDP51689 593 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KLRC3Q07444 240 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PTPROQ16827 1216 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 HSP90AB4PQ58FF6 505 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CTR9Q6PD62 1173 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ARMCX2Q7L311 632 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 EEPD1Q7L9B9 569 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CCDC144CPQ8IYA2 1237 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DCLK2Q8N568 766 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KCNG4Q8TDN1 519 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RAD9AQ99638 391 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ABHD16BQ9H3Z7 469 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 VRTNQ9H8Y1 702 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MKNK2Q9HBH9 465 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ATP8A2Q9NTI2 1148 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KCNK4Q9NYG8 393 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DDX49Q9Y6V7 483 aaKnown RBP6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FRYLO94915 3013 aa6.61□□□□□ -1.35
SMARCE1P3-201ENST00000553649 BAZ2AQ9UIF9 1905 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 COL11A1P12107 1806 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RBAK-RBAKDNI3L0D1 243 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DHX15O43143 795 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PRDM1O75626 825 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 EYA4O95677 639 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KCNJ6P48051 423 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PSMC6P62333 389 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CNTN2Q02246 1040 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 HYAL1Q12794 435 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 IKQ13123 557 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GPNMBQ14956 572 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TCTN1Q2MV58 587 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TLK2Q86UE8 772 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PRPF38AQ8NAV1 312 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MSLNLQ96KJ4 702 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 NSUN5Q96P11 429 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FTOQ9C0B1 505 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PUS7LQ9H0K6 701 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ALDH8A1Q9H2A2 487 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CD207Q9UJ71 328 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MCM3APO60318 1980 aa6.6□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MYH8P13535 1937 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 H3BNC9 293 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 LINC01565O15544 149 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 DYNC1LI2O43237 492 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 NCK2O43639 380 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 MMP20O60882 483 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 APPP05067 770 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 IQCF3P0C7M6 154 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RFX1P22670 979 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SEC13P55735 322 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SNAP25P60880 206 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FSCN1Q16658 493 aaKnown RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 GLIPR1L2Q4G1C9 344 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 EPC2Q52LR7 807 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FBXO16Q8IX29 292 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 CYP2W1Q8TAV3 490 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 KIF1BPQ96EK5 621 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SEMA4AQ9H3S1 761 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SLC38A10Q9HBR0 1119 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 SRA1Q9HD15 236 aaKnown RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 PDGFCQ9NRA1 345 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 ARPP21Q9UBL0 812 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 FBXO40Q9UH90 709 aa6.59□□□□□ -1.35
SMARCE1P3-201ENST00000553649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TMEM232C9JQI7 657 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZEB2O60315 1214 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HMMRO75330 724 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 WNT11O96014 354 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms