RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 LRFN2Q9ULH4 789 aa26.38■■□□□ 1.81
TDP1-205ENST00000553527 IGKV6-21A0A0C4DH24 114 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 PDCP20941 246 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 FGFR4P22455 802 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 EIF4BP23588 611 aaKnown RBP26.37■■□□□ 1.81
TDP1-205ENST00000553527 ERVK-21P61565 698 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 LARP1BQ659C4 914 aaKnown RBP26.37■■□□□ 1.81
TDP1-205ENST00000553527 KSR1Q8IVT5 923 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 SPRYD3Q8NCJ5 442 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 SP7Q8TDD2 431 aaPredicted RBP26.37■■□□□ 1.81
TDP1-205ENST00000553527 GDPD5Q8WTR4 605 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 SLC7A3Q8WY07 619 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 HSD17B14Q9BPX1 270 aa26.37■■□□□ 1.81
TDP1-205ENST00000553527 PRRC2BQ5JSZ5 2229 aaKnown RBP26.37■■□□□ 1.81
TDP1-205ENST00000553527 A0A087WZ62 844 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 GTPBP6O43824 516 aaPredicted RBP26.36■■□□□ 1.81
TDP1-205ENST00000553527 TRAPPC10P48553 1259 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 TOB1P50616 345 aaPredicted RBP26.36■■□□□ 1.81
TDP1-205ENST00000553527 GRB10Q13322 594 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 FIBCD1Q8N539 461 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 TMEM143Q96AN5 459 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 NLRP4Q96MN2 994 aa26.36■■□□□ 1.81
TDP1-205ENST00000553527 JPH2Q9BR39 696 aaPredicted RBP26.36■■□□□ 1.81
TDP1-205ENST00000553527 FDXACB1Q9BRP7 624 aaPredicted RBP26.36■■□□□ 1.81
TDP1-205ENST00000553527 COL4A4P53420 1690 aaPredicted RBP26.35■■□□□ 1.81
TDP1-205ENST00000553527 TRANK1O15050 2925 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 STAG3L1P0CL83 205 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 BTG3Q14201 252 aaPredicted RBP26.35■■□□□ 1.81
TDP1-205ENST00000553527 ZNF710Q8N1W2 664 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 PIGOQ8TEQ8 1089 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 GCOM2Q9BZD3 368 aaPredicted RBP26.35■■□□□ 1.81
TDP1-205ENST00000553527 PCDHB7Q9Y5E2 793 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 PCDHB6Q9Y5E3 794 aa26.35■■□□□ 1.81
TDP1-205ENST00000553527 DGKIO75912 1065 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 DARSP14868 501 aaKnown RBP26.34■■□□□ 1.81
TDP1-205ENST00000553527 ORC2Q13416 577 aaPredicted RBP26.34■■□□□ 1.81
TDP1-205ENST00000553527 PAN2Q504Q3 1202 aaKnown RBP26.34■■□□□ 1.81
TDP1-205ENST00000553527 NPAS4Q8IUM7 802 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 FBXO22Q8NEZ5 403 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 NEK9Q8TD19 979 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 CCDC43Q96MW1 224 aaKnown RBP26.34■■□□□ 1.81
TDP1-205ENST00000553527 TSHZ2Q9NRE2 1034 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 RGS18Q9NS28 235 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 MTCH2Q9Y6C9 303 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 UNC80Q8N2C7 3258 aa26.34■■□□□ 1.81
TDP1-205ENST00000553527 SRGAP2CP0DJJ0 459 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 ZSCAN20P17040 1043 aaPredicted RBP26.33■■□□□ 1.81
TDP1-205ENST00000553527 RFC5P40937 340 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 SARSP49591 514 aaKnown RBP26.33■■□□□ 1.81
TDP1-205ENST00000553527 GATMP50440 423 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 CDC42EP1Q00587 391 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 PTGDRQ13258 359 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 EPC2Q52LR7 807 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 SLC24A5Q71RS6 500 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.33■■□□□ 1.81
TDP1-205ENST00000553527 EXOC8Q8IYI6 725 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 PRPF31Q8WWY3 499 aaKnown RBP26.33■■□□□ 1.81
TDP1-205ENST00000553527 DHX33Q9H6R0 707 aaKnown RBP26.33■■□□□ 1.81
TDP1-205ENST00000553527 PRDM6Q9NQX0 595 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 ADGRA3Q8IWK6 1321 aa26.33■■□□□ 1.81
TDP1-205ENST00000553527 REV3LO60673 3130 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 LPXNO60711 386 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 EMC2Q15006 297 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 CATSPER3Q86XQ3 398 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 TMEM192Q8IY95 271 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 C4orf32Q8N8J7 132 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 C1orf112Q9NSG2 853 aa26.32■■□□□ 1.8
TDP1-205ENST00000553527 VPS37CA5D8V6 355 aaPredicted RBP26.31■■□□□ 1.8
TDP1-205ENST00000553527 MED24O75448 989 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 SPATA31C1P0DKV0 1188 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 CRIPAKQ8N1N5 446 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 PSPC1Q8WXF1 523 aaKnown RBP26.31■■□□□ 1.8
TDP1-205ENST00000553527 ZNF689Q96CS4 500 aaPredicted RBP26.31■■□□□ 1.8
TDP1-205ENST00000553527 MTRQ99707 1265 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 ANKEF1Q9NU02 776 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 PPME1Q9Y570 386 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 COL4A3BPQ9Y5P4 624 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 RALGAPA2Q2PPJ7 1873 aa26.31■■□□□ 1.8
TDP1-205ENST00000553527 FNDC1Q4ZHG4 1894 aaPredicted RBP26.3■■□□□ 1.8
TDP1-205ENST00000553527 C9IYK1 514 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 LYPLA2O95372 231 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 CTNNB1P35222 781 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 DSC3Q14574 896 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 SKIV2LQ15477 1246 aaKnown RBP26.3■■□□□ 1.8
TDP1-205ENST00000553527 ZNF410Q86VK4 478 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 ERMNQ8TAM6 284 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 SAMD11Q96NU1 681 aa26.3■■□□□ 1.8
TDP1-205ENST00000553527 SYT1P21579 422 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 RARRES1P49788 294 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 LAMTOR4Q0VGL1 99 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 FAM102BQ5T8I3 360 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 RNF169Q8NCN4 708 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 TCP11Q8WWU5 503 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 INO80BQ9C086 356 aaPredicted RBP26.29■■□□□ 1.8
TDP1-205ENST00000553527 RC3H2Q9HBD1 1191 aaKnown RBP26.29■■□□□ 1.8
TDP1-205ENST00000553527 TUFT1Q9NNX1 390 aa26.29■■□□□ 1.8
TDP1-205ENST00000553527 POU3F3P20264 500 aaPredicted RBP26.28■■□□□ 1.8
TDP1-205ENST00000553527 GPM6BQ13491 265 aa26.28■■□□□ 1.8
TDP1-205ENST00000553527 POTEGQ6S5H5 508 aa26.28■■□□□ 1.8
TDP1-205ENST00000553527 MAEAQ7L5Y9 396 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms