RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ALG13Q9NP73 1137 aaKnown RBP8.47□□□□□ -1.05
ATXN3-219ENST00000553488 MUTYHQ9UIF7 546 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 ATXN7L1Q9ULK2 861 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-219ENST00000553488 FAM50BQ9Y247 325 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 CACNA1AO00555 2505 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 CCDC171Q6TFL3 1326 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 FRYLO94915 3013 aa8.47□□□□□ -1.05
ATXN3-219ENST00000553488 C17orf102A2RUQ5 167 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 GRM6O15303 877 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 TREHO43280 583 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 SORBS3O60504 671 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 PPP1R11O60927 126 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 LGALS2P05162 132 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 CTSHP09668 335 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 SMIM10L2AP0DMW4 78 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 SMIM10L2BP0DMW5 78 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 MX2P20592 715 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 CTNNB1P35222 781 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ADAM17P78536 824 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 NMIQ13287 307 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 SMAD4Q13485 552 aaKnown RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 PGM5Q15124 567 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 CLUL1Q15846 466 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 MCMDC2Q4G0Z9 681 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ASPRV1Q53RT3 343 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 STOX1Q6ZVD7 989 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 STAG2Q8N3U4 1231 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ATP6V0A1Q93050 837 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 MTMR8Q96EF0 704 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 IFIH1Q9BYX4 1025 aaKnown RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 BCAS3Q9H6U6 928 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 MRPL11Q9Y3B7 192 aaKnown RBP8.46□□□□□ -1.06
ATXN3-219ENST00000553488 FRMPD4Q14CM0 1322 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ADGRA3Q8IWK6 1321 aa8.46□□□□□ -1.06
ATXN3-219ENST00000553488 ZNF292O60281 2723 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 A0A1W2PNR3 127 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 H3BRB1 525 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 NCK2O43639 380 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 CFBP00751 764 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 MMP1P03956 469 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 CELA2BP08218 269 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 GTF2F1P35269 517 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 NT5C2P49902 561 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 PSMA6P60900 246 aaKnown RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 DPYDQ12882 1025 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 CAMK1Q14012 370 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 SLC35G1Q2M3R5 365 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 FAM26DQ5JW98 314 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 KCNV1Q6PIU1 500 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 EP400NLQ6ZTU2 488 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 BMP8AQ7Z5Y6 402 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 TICAM2Q86XR7 235 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 ENAHQ8N8S7 591 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 ESR2Q92731 530 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 APBB2Q92870 758 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 MSLNLQ96KJ4 702 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 MFSD14AQ96MC6 490 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 C11orf84Q9BUA3 381 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 UPF3BQ9BZI7 483 aaKnown RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 LMAN2LQ9H0V9 348 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 RNPEPQ9H4A4 650 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 TUT1Q9H6E5 874 aaKnown RBP8.45□□□□□ -1.06
ATXN3-219ENST00000553488 DNAH14Q0VDD8 3507 aa8.45□□□□□ -1.06
ATXN3-219ENST00000553488 MYO10Q9HD67 2058 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 C2CD2LO14523 706 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 LINC01565O15544 149 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 EYA4O95677 639 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 RB1P06400 928 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 TGFB3P10600 412 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 MYCLP12524 364 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 HOXA13P31271 388 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 BMPR1AP36894 532 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 PDE1AP54750 535 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 MGAT3Q09327 533 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 TCF15Q12870 199 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 FIBCD1Q8N539 461 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 LMBR1Q8WVP7 490 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 LINC01599Q8WXQ3 324 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 EDAQ92838 391 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 ACDQ96AP0 544 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 ZNF689Q96CS4 500 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 IL17RAQ96F46 866 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 ABHD17AQ96GS6 310 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 AMNQ9BXJ7 453 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 RNF41Q9H4P4 317 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 KAT14Q9H8E8 782 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 EHMT1Q9H9B1 1298 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 MAP3K20Q9NYL2 800 aaKnown RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 CD207Q9UJ71 328 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 TELO2Q9Y4R8 837 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms