RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 CACNA1BQ00975 2339 aa4.35□□□□□ -1.71
FOXN3-203ENST00000553353 NCOR2Q9Y618 2525 aa4.35□□□□□ -1.71
FOXN3-203ENST00000553353 LAMB2P55268 1798 aa4.35□□□□□ -1.71
FOXN3-203ENST00000553353 FAM221AA4D161 298 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 TCP10L2B9ZVM9 353 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 F8W031 263 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-203ENST00000553353 EFEMP2O95967 443 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 ENDOUP21128 410 aaKnown RBP4.34□□□□□ -1.71
FOXN3-203ENST00000553353 GBP1P32455 592 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 LMNB2Q03252 620 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 EFEMP1Q12805 493 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 TCF15Q12870 199 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 LAPTM5Q13571 262 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 GALNT18Q6P9A2 607 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 PHACTR4Q8IZ21 702 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 ZDHHC14Q8IZN3 488 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 TTLL11Q8NHH1 800 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 PLBD2Q8NHP8 589 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 COA7Q96BR5 231 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 TCTN2Q96GX1 697 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 RNPC3Q96LT9 517 aaKnown RBP4.34□□□□□ -1.71
FOXN3-203ENST00000553353 FOXP3Q9BZS1 431 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 CNOT11Q9UKZ1 510 aaKnown RBP4.34□□□□□ -1.71
FOXN3-203ENST00000553353 PSME4Q14997 1843 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 OTOFQ9HC10 1997 aa4.34□□□□□ -1.71
FOXN3-203ENST00000553353 ZFHX2Q9C0A1 2572 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 NUP98P52948 1817 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 DDX60LQ5H9U9 1706 aaKnown RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 MED19A0JLT2 244 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 TMEM82A0PJX8 343 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CHURC1-FNTBB4DL54 471 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 DNM1LO00429 736 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 RGS13O14921 159 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 U2SURPO15042 1029 aaKnown RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 KIAA0355O15063 1070 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 MYO1BO43795 1136 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 HTR3BO95264 441 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CDR1P51861 262 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CACNB3P54284 484 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CCL14Q16627 93 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 AAK1Q2M2I8 961 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 TRIM60Q495X7 471 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CCDC152Q4G0S7 254 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 FKBP1CQ5VVH2 108 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 APOBEC3HQ6NTF7 200 aaKnown RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 SLC39A5Q6ZMH5 540 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 BNC2Q6ZN30 1099 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 FAM83AQ86UY5 434 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 ANKRD18AQ8IVF6 992 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 FAM178BQ8IXR5 827 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 ANKRD13CQ8N6S4 541 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 TRPV1Q8NER1 839 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 PNISRQ8TF01 805 aaKnown RBP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.33□□□□□ -1.724e-7■■■■■ 36.9
FOXN3-203ENST00000553353 TMPRSS5Q9H3S3 457 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 GREM2Q9H772 168 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 MORF4L1Q9UBU8 362 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 KLHL3Q9UH77 587 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 AFG3L2Q9Y4W6 797 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 MTCH2Q9Y6C9 303 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 CHD6Q8TD26 2715 aa4.33□□□□□ -1.72
FOXN3-203ENST00000553353 DMDP11532 3685 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 ATRXP46100 2492 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 EPOPA6NHQ4 379 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 PDE8AO60658 829 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 PCCAP05165 728 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 HSP90B1P14625 803 aaKnown RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 EIF2S2P20042 333 aaKnown RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 TLE2Q04725 743 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 PLP2Q04941 152 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 CAMK2GQ13555 558 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 KRT24Q2M2I5 525 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 VMACQ2NL98 169 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 TMEM240Q5SV17 173 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 TREML2Q5T2D2 321 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 MEI1Q5TIA1 1274 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 MIGA2Q7L4E1 593 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 IGDCC3Q8IVU1 814 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 RTF1Q92541 710 aaKnown RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 LPAR1Q92633 364 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 FCRL2Q96LA5 508 aaPredicted RBP4.32□□□□□ -1.72
FOXN3-203ENST00000553353 PWWP2AQ96N64 755 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 KIF2CQ99661 725 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 FLRT1Q9NZU1 646 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 KLHL14Q9P2G3 628 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 ATP11BQ9Y2G3 1177 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 PCDHA5Q9Y5H7 936 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 TAF6LQ9Y6J9 622 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 UNC79Q9P2D8 2635 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 LTBP2Q14767 1821 aa4.32□□□□□ -1.72
FOXN3-203ENST00000553353 SPTBN4Q9H254 2564 aa4.31□□□□□ -1.72
FOXN3-203ENST00000553353 CACNA1HO95180 2353 aa4.31□□□□□ -1.72
FOXN3-203ENST00000553353 FADS2P1A8MWK0 482 aa4.31□□□□□ -1.72
FOXN3-203ENST00000553353 PROB1E7EW31 1015 aa4.31□□□□□ -1.72
FOXN3-203ENST00000553353 F13A1P00488 732 aa4.31□□□□□ -1.72
FOXN3-203ENST00000553353 CYP2B6P20813 491 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms