RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	KCTD17	Q8N5Z5	321 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	METTL13	Q8N6R0	699 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SPRYD3	Q8NCJ5	442 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SLC7A3	Q8WY07	619 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	MAP7D2	Q96T17	732 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	OSMR	Q99650	979 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	JPH2	Q9BR39	696 aa	Predicted RBP	11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	PBX4	Q9BYU1	374 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	RAB34	Q9BZG1	259 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SUGCT	Q9HAC7	445 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	DDX19A	Q9NUU7	478 aa	Known RBP	11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	PADI3	Q9ULW8	664 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	YBX2	Q9Y2T7	364 aa	Known RBP	11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SRPRB	Q9Y5M8	271 aa	Known RBP	11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	SLC4A7	Q9Y6M7	1214 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	MYH15	Q9Y2K3	1946 aa		11.28	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	CHD9	Q3L8U1	2897 aa		11.27	□□□□□ -0.6
CALCOCO1-222	ENST00000553154	YEATS4	O95619	227 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EYA4	O95677	639 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	LINC00271	P0C7V0	271 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ATP2A2	P16615	1042 aa	Known RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CYP11B2	P19099	503 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GLRA2	P23416	452 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EIF4B	P23588	611 aa	Known RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TMOD1	P28289	359 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PBX2	P40425	430 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	POLG	P54098	1239 aa	Predicted RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	HTRA4	P83105	476 aa	Predicted RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CAPS	Q13938	189 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	IKBKE	Q14164	716 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PADI6	Q6TGC4	694 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KSR1	Q8IVT5	923 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	HERC6	Q8IVU3	1022 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	EXOC8	Q8IYI6	725 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DAW1	Q8N136	415 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SP7	Q8TDD2	431 aa	Predicted RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ASAP3	Q8TDY4	903 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PRPF31	Q8WWY3	499 aa	Known RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	BSND	Q8WZ55	320 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TMEM143	Q96AN5	459 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PPP1R16B	Q96T49	567 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CCSER1	Q9C0I3	900 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CSRNP2	Q9H175	543 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MTIF3	Q9H2K0	278 aa	Known RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TTYH1	Q9H313	450 aa	Predicted RBP	11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ATP6V0A4	Q9HBG4	840 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	BLOC1S4	Q9NUP1	217 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KIAA1024	Q9UPX6	916 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	COL4A3BP	Q9Y5P4	624 aa		11.27	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MICAL3	Q7RTP6	2002 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TMEM265	A0A087WTH1	108 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		A0A087WZ62	844 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		C9IYK1	514 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		E9PMD0	336 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		M0QZ92	97 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ENPP3	O14638	875 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	USO1	O60763	962 aa	Known RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GJB5	O95377	273 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	HSP90AA1	P07900	732 aa	Known RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	DNAJB2	P25686	324 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MARCKS	P29966	332 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	POU5F1B	Q06416	359 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	LAMTOR4	Q0VGL1	99 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	AMHR2	Q16671	573 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NAALADL2	Q58DX5	795 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	KRT79	Q5XKE5	535 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	C1orf186	Q6ZWK4	172 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PSPC1	Q8WXF1	523 aa	Known RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CHAMP1	Q96JM3	812 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZNF668	Q96K58	619 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MTR	Q99707	1265 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RUSC1	Q9BVN2	902 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	NFKBIZ	Q9BYH8	718 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	BHMT2	Q9H2M3	363 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MINDY3	Q9H8M7	445 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	GPRC5C	Q9NQ84	441 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ST3GAL5	Q9UNP4	418 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	AKT3	Q9Y243	479 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PCDHA11	Q9Y5I1	949 aa		11.26	□□□□□ -0.61
CALCOCO1-222	ENST00000553154		A0A087X0B3	334 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ZBBX	A8MT70	800 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PPP6R2	O75170	966 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	MYOG	P15173	224 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RABGGTB	P53611	331 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	SLC12A3	P55017	1021 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PTEN	P60484	403 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	FAM189B	P81408	668 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CDC42EP1	Q00587	391 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	PAK2	Q13177	524 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	BECN1	Q14457	450 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	ATL3	Q6DD88	541 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	CABP7	Q86V35	215 aa		11.25	□□□□□ -0.61
CALCOCO1-222	ENST00000553154	RHPN2	Q8IUC4	686 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms