RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ZBP1Q9H171 429 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 HBP1O60381 514 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 GPR32O75388 356 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 SP9P0CG40 484 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 SLC26A2P50443 739 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 ACTR2P61160 394 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 WDR81Q562E7 1941 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 ZFHX4Q86UP3 3567 aa12.99□□□□□ -0.33
SUPT16H-202ENST00000552829 COL1A2P08123 1366 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 IGHDP01880 384 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 POLGP54098 1239 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 AUTS2Q8WXX7 1259 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 OSMRQ99650 979 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 KCNH7Q9NS40 1196 aa12.98□□□□□ -0.33
SUPT16H-202ENST00000552829 ATRXP46100 2492 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 CTSAP10619 480 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 BCAR1P56945 870 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 AAMPQ13685 434 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 GIT2Q14161 759 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 PHLDB3Q6NSJ2 640 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 ZC3H14Q6PJT7 736 aaKnown RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
SUPT16H-202ENST00000552829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 NT5C1B-RDH14C9J2C7 533 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 C22orf31O95567 290 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 ATP4AP20648 1035 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 ATXN1P54253 815 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 ITGB3BPQ13352 177 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 LETM2Q2VYF4 491 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 ABHD15Q6UXT9 468 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 CABP7Q86V35 215 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 C1orf210Q8IVY1 113 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 MAML2Q8IZL2 1156 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 RSAD2Q8WXG1 361 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 TBC1D17Q9HA65 648 aa12.96□□□□□ -0.33
SUPT16H-202ENST00000552829 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.34
SUPT16H-202ENST00000552829 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.34
SUPT16H-202ENST00000552829 A0A0U1RQF3 1178 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 CCNE2O96020 404 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 VTNP04004 478 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 CFHP08603 1231 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 GLULP15104 373 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 UBE2SQ16763 222 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 C15orf39Q6ZRI6 1047 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 PPFIBP1Q86W92 1011 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 SLC44A3Q8N4M1 653 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 HELQQ8TDG4 1101 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 BCL7CQ8WUZ0 217 aaPredicted RBP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 TMEM169Q96HH4 297 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 VN1R3Q9BXE9 311 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 RHOBTB2Q9BYZ6 727 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 ADAMTS10Q9H324 1103 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 AGO4Q9HCK5 861 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 PCDHA6Q9UN73 950 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 PCDHA8Q9Y5H6 950 aa12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 MTCL1Q9Y4B5 1905 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 CNOT1A5YKK6 2376 aaKnown RBP12.95□□□□□ -0.34
SUPT16H-202ENST00000552829 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 POTEMA6NI47 508 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 LILRB3O75022 631 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 PAPLNO95428 1278 aa12.94□□□□□ -0.34
SUPT16H-202ENST00000552829 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms