RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ARID5BQ14865 1188 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 CSRP2Q16527 193 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SLFNL1Q499Z3 407 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 LCE3BQ5TA77 95 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 LAIR1Q6GTX8 287 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 CTR9Q6PD62 1173 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 DCLRE1AQ6PJP8 1040 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 C19orf48Q6RUI8 117 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 TMC5Q6UXY8 1006 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 GATA6Q92908 595 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 MKNK2Q9HBH9 465 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 NGRNQ9NPE2 291 aaKnown RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 DDX41Q9UJV9 622 aaKnown RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SUPT16HQ9Y5B9 1047 aaKnown RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 PNMA6EA0A0J9YXQ4 647 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 EIF4E1BA6NMX2 242 aaKnown RBP9.78□□□□□ -0.84
PRIM1-208ENST00000552590 TTLL8A6PVC2 850 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 CLASP2O75122 1294 aaKnown RBP9.78□□□□□ -0.84
PRIM1-208ENST00000552590 SRFP11831 508 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 SLC1A4P43007 532 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 LAMC2Q13753 1193 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 CCDC149Q6ZUS6 474 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 TMC7Q7Z402 723 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 VWA5B2Q8N398 1253 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 SLC44A3Q8N4M1 653 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 COLGALT1Q8NBJ5 622 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 MRPS27Q92552 414 aaKnown RBP9.78□□□□□ -0.84
PRIM1-208ENST00000552590 GPR20Q99678 358 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 HNRNPABQ99729 332 aaKnown RBP9.78□□□□□ -0.84
PRIM1-208ENST00000552590 C16orf70Q9BSU1 422 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 BCO2Q9BYV7 579 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 WASF3Q9UPY6 502 aa9.78□□□□□ -0.84
PRIM1-208ENST00000552590 FNDC1Q4ZHG4 1894 aaPredicted RBP9.77□□□□□ -0.85
PRIM1-208ENST00000552590 PPFIA4O75335 1185 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 TTLL1O95922 423 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 PSAPL1Q6NUJ1 521 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 GMCL1Q96IK5 515 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 ENAMQ9NRM1 1142 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
PRIM1-208ENST00000552590 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
PRIM1-208ENST00000552590 MTF2Q9Y483 593 aaPredicted RBP9.77□□□□□ -0.85
PRIM1-208ENST00000552590 SPTAN1Q13813 2472 aaKnown RBP9.77□□□□□ -0.85
PRIM1-208ENST00000552590 KAT6AQ92794 2004 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 DOCK8Q8NF50 2099 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 ANKRD17O75179 2603 aaKnown RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 C2orf16Q68DN1 1984 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 COL12A1Q99715 3063 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 B4DLN1 442 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 PLA2G6O60733 806 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 STAG3L1P0CL83 205 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 MRPL12P52815 198 aaKnown RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 ATP8B2P98198 1209 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 PTPN14Q15678 1187 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 AMHR2Q16671 573 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 HSDL1Q3SXM5 330 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 AGO3Q9H9G7 860 aaKnown RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 TYW1Q9NV66 732 aaKnown RBP9.76□□□□□ -0.85
PRIM1-208ENST00000552590 MYO9AB2RTY4 2548 aa9.76□□□□□ -0.85
PRIM1-208ENST00000552590 APC2O95996 2303 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 CDC14CA4D256 554 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 C2orf71A6NGG8 1288 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 TBKBP1A7MCY6 615 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 H3BRB1 525 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 PRDM1O75626 825 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 CELA2BP08218 269 aaPredicted RBP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 EPCAMP16422 314 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 CD52P31358 61 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 STARD6P59095 220 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 PLCB3Q01970 1234 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 MGAT3Q09327 533 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 FBXO47Q5MNV8 452 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 MRPL43Q8N983 215 aaKnown RBP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 SPATA33Q96N06 139 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 RANBP17Q9H2T7 1088 aaKnown RBP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 TUT1Q9H6E5 874 aaKnown RBP9.75□□□□□ -0.85
PRIM1-208ENST00000552590 RXFP3Q9NSD7 469 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 LRFN2Q9ULH4 789 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 SYNPO2Q9UMS6 1093 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
PRIM1-208ENST00000552590 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 GIPC1O14908 333 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 SCG2P13521 617 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 CA8P35219 290 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 SLC16A2P36021 539 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 LIMK1P53667 647 aa9.74□□□□□ -0.85
PRIM1-208ENST00000552590 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
PRIM1-208ENST00000552590 UBXN2BQ14CS0 331 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms